Pairwise Alignments

Query, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1037 a.a., multidrug efflux RND transporter permease AcrD from Escherichia coli ECRC100

 Score = 1095 bits (2833), Expect = 0.0
 Identities = 552/1035 (53%), Positives = 746/1035 (72%), Gaps = 5/1035 (0%)

Query: 1    MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES 60
            M  FFIDRPIFAWV+A+ + L G LAI  LPV QYP++APP V + A YPGASAQTL+ +
Sbjct: 1    MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENT 60

Query: 61   VVSLIEQELNGADHLLYFESQSS-LGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQ 119
            V  +IEQ + G D+L+Y  SQSS  G A++T +F+ GT+P+ A   VQN+L++   +LPQ
Sbjct: 61   VTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQ 120

Query: 120  AVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGA 179
            AV  QG+ V K     +L +   S DG +D   ++DY+A N+ + L R++GVG    YG+
Sbjct: 121  AVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGS 180

Query: 180  ERAMRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQL 239
            + +MR+W+DP KL  F +T  DV  AI +QNAQ++ G +G  P  + Q + A I  +  L
Sbjct: 181  QYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL 240

Query: 240  STPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANAL 299
             TP +F DI L+ N DGS VR+GDVA  E+G+++Y + +R NGKP++ + V+L+ GAN +
Sbjct: 241  QTPEQFRDITLRVNQDGSEVRLGDVATAEMGAEKYDYLSRFNGKPASGLGVKLASGANEM 300

Query: 300  NTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQ 359
             TA LV  ++DEL++YFP  +EYK+ Y+T+ FVK SI  VV TLLEA+ALVF VM+LFLQ
Sbjct: 301  ATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQ 360

Query: 360  NVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 419
            N R TLIPT+ VP+ LMGTF+ +   G+S+N LTMF MVLAIG+LVDDAIVVVENVERIM
Sbjct: 361  NFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVERIM 420

Query: 420  ATEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILF 479
            + EGL+P+EAT+K+MGQI GA++GI +VL AVF+PMAF  G+ G IY+QFS+++  +++ 
Sbjct: 421  SEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL 480

Query: 480  SAFLALTLTPALCATLLKPIAKGEHHAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGRY 539
            S  +A+ LTPALCATLLKP+ KGEHH + GFF WFN  F +  +RYE  VA  L RS R+
Sbjct: 481  SVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRW 540

Query: 540  LLIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAH--NA 597
            ++IY++LL G+ ++F RLP+SFLP+ED+G   T +QLP G+++ +T++V EQIE +    
Sbjct: 541  IVIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTH 600

Query: 598  EEPGVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSDDSAS-SIADRANMAFSELKDA 656
            E+  +      +G    G+GQN A  F  LKDWSER S    S +I +RA  AF+++K+A
Sbjct: 601  EKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSKTGTSFAIIERATKAFNQIKEA 660

Query: 657  IAYAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALA 716
               A  PP + GLG+S+GF+  LQD  G GH ALMAAR +LLA A ++P L  VR + L 
Sbjct: 661  RVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLD 720

Query: 717  EAPQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQ 776
            ++PQ+Q+++D+++A ALGV+  D+ + L +A GS+Y+NDF ++GR+++V VQA    R  
Sbjct: 721  DSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRML 780

Query: 777  VADLMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMD 836
              D+    VRN  G MVP SAF  ++W  G  +L RYNGY A+ I GEAAPG STG AMD
Sbjct: 781  PDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMD 840

Query: 837  EIQRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVL 896
             ++ LV QLP G G EWT +S QERLSGAQAP L  +SLL+VFLCLAALYESWS+P SV+
Sbjct: 841  IMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVM 900

Query: 897  LVVPLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTA 956
            LVVPLGV+GA++A  +RG+ NDV+F+VGL+T+IGLSAKNAILI+EFA ++  +G DL  A
Sbjct: 901  LVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEA 960

Query: 957  TLKAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITAT-LAVVFVP 1015
            TL A R RLRPI+MTSLAFI GV+P+A +TGA S  Q A+GTGV+GGMI+AT LA+ FVP
Sbjct: 961  TLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVP 1020

Query: 1016 VFFVVVMKLMKKKSR 1030
            +FFV+V +    K R
Sbjct: 1021 LFFVLVRRRFPLKPR 1035