Pairwise Alignments

Query, 430 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 440 a.a., L-arabinose transporter (from data) from Pseudomonas simiae WCS417

 Score =  194 bits (494), Expect = 3e-54
 Identities = 121/419 (28%), Positives = 203/419 (48%), Gaps = 22/419 (5%)

Query: 2   ETVKLATRRWWYIMPIVFITYSLAYLDRANYGFAAASGMAEDLMITPGMSSLLGALFFLG 61
           + ++L  R    ++P + + Y +AY+DR+  GFA    M  D+ I      L   LFF+G
Sbjct: 3   QELRLIRRITLKLIPFLILLYLIAYVDRSAVGFAKLH-MGADVGIGDAAYGLGAGLFFIG 61

Query: 62  YFFFQVPGAIYAQKRSVKKLIFVSLILWGGLATLTGVVSNAYMLIVIRFMLGVVEAAVMP 121
           YF F++P  +   +   ++     +I WG +      V   +   V+RF+LG  EA   P
Sbjct: 62  YFLFEIPSNLMLDRFGARRWFARIMITWGAITIGMAFVQGPHSFYVMRFLLGAAEAGFFP 121

Query: 122 AMLVYLCHWFTRAERSRANTFLILGNPVTMLWMSVVSGYLVQH------FSWRWMFIIEG 175
            +L Y+  WF    R +     IL  P+ M+    VSG L+          W+W+FI+ G
Sbjct: 122 GVLYYITQWFPVRHRGKILGLFILSQPIAMMITGPVSGGLLGMDGMLGLHGWQWLFIVIG 181

Query: 176 LPAVLWAFIWWKLADERPKDAKWLSDSEKQDL--ETALAAEQVGIKAVKNYAEAFRSPKV 233
            PA+L  +   +   + PK   W+S+ EK  L  E A   +  G     N   A +  +V
Sbjct: 182 TPAILLTWPVLRYLPDGPKQVTWMSEDEKAWLTGELAKDLQAYGQTRHGNPLHALKDKRV 241

Query: 234 IILALQFFCWSIGVYGFVLWLPSILKQGLQMDMVEAGWLSALPYLAAVIGMLAVSWGSDK 293
           ++LAL +   ++ +YG  LWLP+++KQ    D+   G++SA+PY+  +IG+L +   SD+
Sbjct: 242 LLLALFYLPVTLSIYGLGLWLPTLIKQFGGSDLT-TGFISAVPYIFGIIGLLIIPRSSDR 300

Query: 294 LQKRKRFVWPPLLIASIAFYASYVLGAEHFWWSYTLLVIAGAC-----MYAPYGPFFAIV 348
           L  R   +    ++ +I  + S        W +  LL +A  C     M++    F+ + 
Sbjct: 301 LNDRYGHLAVLYVLGAIGLFFS-------AWLTVPLLQMAALCLAAFAMFSCTAVFWTLP 353

Query: 349 PEILPANVAGGAMALINSMGALGSFGGSYLVGYLNSSTGSPGTSYLLMSGALLLSVVLT 407
                   A   +ALINS+G LG + G +++G L   TG+  +    +SG ++  +VLT
Sbjct: 354 GRFFAGASAAAGIALINSVGNLGGYIGPFVIGALKEYTGNLASGLYFLSGVMVFGLVLT 412