Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  584 bits (1506), Expect = e-171
 Identities = 317/539 (58%), Positives = 405/539 (75%)

Query: 1   MSLRQLNIAPRAFLGFAFIALLVILLGVFAVNRMAQIRQSSVEMTATQLPSVTSLGVITE 60
           MSLR +NIAPRAFLGFAFI  L++ LGVFA+N+M++IR ++ ++T + +PS+ +L   T+
Sbjct: 1   MSLRNMNIAPRAFLGFAFIGALMLFLGVFALNQMSKIRGATEDITMSSVPSIRALDEFTQ 60

Query: 61  NVLRLRILSFRVLVNREPASLQEAETRIGVLVDKVKTAQASYAALPAGPEEAALYKTFMV 120
             LRLR+LS+R+L NREP   Q+      V   +++TAQ  Y  L    EE A Y  ++ 
Sbjct: 61  LTLRLRVLSYRLLTNREPEVQQKTLEAFEVRNQQIRTAQGIYEKLIESSEERAAYDDYVR 120

Query: 121 TLDNYLKAQADMLALSKQGKVDEMRALINSRIKDGTDQMGEQLNKLIAINVADAKTADTD 180
            L  Y + +  M +LS+  +V+E+R+L+N+ +   ++Q+   L +L+ IN   A   + D
Sbjct: 121 LLGQYHQIEERMKSLSRANQVEELRSLLNNELLSNSEQVNAVLTRLLDINNKMALATNKD 180

Query: 181 AGQSYDGAITGVIAVSVAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGNLSKAIEDD 240
           A   Y+ A   V+++ V A LLT+L AWLLTRSI  P+ +A+E AE +A GNL++ I+ D
Sbjct: 181 AEDQYNMAFNMVVSLLVIATLLTLLFAWLLTRSITLPIAQALEAAEEVAEGNLTRPIKVD 240

Query: 241 GKDEPARLLGALATMQANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQ 300
           G DE  RLL A+A MQ  LR T+Q IAGSATQLASAAEEL+AVT+E+++GL QQNNEI+Q
Sbjct: 241 GSDEAGRLLAAMAKMQDKLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQQNNEIEQ 300

Query: 301 AATAVNEMTAAVEEVARNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAM 360
           AATAVNEMT+AVEEVARNAVSTSEAS  +  +A +GRD V ETV AI+ M+ DVQ TA +
Sbjct: 301 AATAVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATATL 360

Query: 361 IEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420
           I  LA + RDIGKVLDVIR +A+QTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT
Sbjct: 361 IGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420

Query: 421 AQSTQEIEKMVAGIQNGTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERN 480
            QST EIE+M+  IQ GT  AV SM+ S +R ++TL +A+ AG++L+ I  +I  INERN
Sbjct: 421 QQSTSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINERN 480

Query: 481 LVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARF 539
           LVIASA+EEQAQV+REVDRNLVNIRDL+ QSA GA+QTSAAS ELSRLAVDLNGMV RF
Sbjct: 481 LVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGMVGRF 539