Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  320 bits (820), Expect = 1e-91
 Identities = 187/419 (44%), Positives = 271/419 (64%), Gaps = 12/419 (2%)

Query: 128 AQADMLALSKQGKVDEMRALINSRI--KDGTDQMGEQLNKLIA----INVADAKTADTDA 181
           A  D  A +  G  D +    N+++  +    +M EQ   L+     +  +  +  D  A
Sbjct: 223 ASLDDAATAMGGYRDAVTQFGNAQLASEQALQRMVEQGTVLLQASQMMTASQTEVRDAAA 282

Query: 182 GQSYDGAITGVIAVSVAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGNLSKAIEDDG 241
            Q    A T +   +V A  L +L AW +TR I+ PLR+ +  AE +A G+L+++++   
Sbjct: 283 AQ----AKTLLTVATVLALALGLLAAWAITRQIIIPLRQTLRAAERVASGDLTQSLQVQR 338

Query: 242 KDEPARLLGALATMQANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQA 301
           +DE  +L  ++  M   LR+ I  I    TQ+ASAAEELSAVTE+ S G+  Q  E DQ 
Sbjct: 339 RDELGQLQASMHRMTQGLRELIGGIGDGVTQIASAAEELSAVTEQTSAGVNNQKVETDQV 398

Query: 302 ATAVNEMTAAVEEVARNAVSTSEASSQSNQAAREGRDRVV-ETVGAIQTMTQDVQNTAAM 360
           ATA+N+MTA V EVARNA   SEA+  ++Q AREG DRVV E V  I+ +  +V N++  
Sbjct: 399 ATAMNQMTATVHEVARNAEQASEAALMADQQAREG-DRVVGEAVAQIERLASEVVNSSEA 457

Query: 361 IEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420
           +  L T+   IG VLDVI+++A+QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA RT
Sbjct: 458 MNLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT 517

Query: 421 AQSTQEIEKMVAGIQNGTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERN 480
            QST+EIE+++AG+Q+GT      M  S Q T +++E+ R AG +LE IT+++S I   N
Sbjct: 518 QQSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVSSIQAMN 577

Query: 481 LVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARF 539
             IA+A+EEQ  V+ E++R+++N+RD++ Q++A + +T+++S EL+RL   L G+V RF
Sbjct: 578 QQIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLGTHLQGLVGRF 636