Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

 Score =  257 bits (657), Expect = 7e-73
 Identities = 144/390 (36%), Positives = 231/390 (59%), Gaps = 2/390 (0%)

Query: 151 RIKDGTDQMG-EQLNKLIAINVADAKTADTDAGQSYDGAI-TGVIAVSVAAALLTVLLAW 208
           R   G D+   EQ+++L+    ADA+        S +  +  G++ +  +A L+ +L  W
Sbjct: 163 RAVKGVDRAASEQMSELVEQLRADARQRAASINASAERTVWLGLLVMLASAVLVGLLSLW 222

Query: 209 LLTRSIVTPLRKAVEVAETIAGGNLSKAIEDDGKDEPARLLGALATMQANLRQTIQHIAG 268
           L+ RS++ P+R+ +E    ++ G+ +  ++   +DE  RL  A  T++  L  T+  +  
Sbjct: 223 LVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLARAANTLRDFLADTVGRLQD 282

Query: 269 SATQLASAAEELSAVTEEASKGLQQQNNEIDQAATAVNEMTAAVEEVARNAVSTSEASSQ 328
           +A +L  A+ +L ++  + ++G   Q    DQ ATA++EM+A  +EVAR+A   + A+  
Sbjct: 283 NAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEMSATAQEVARHAAEAARAADD 342

Query: 329 SNQAAREGRDRVVETVGAIQTMTQDVQNTAAMIEGLATQGRDIGKVLDVIRAIAEQTNLL 388
           ++ +A+ G   + +T+  I  + +++  TA +I  L      IGKVL+VIR IAEQTNLL
Sbjct: 343 ADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTRIGKVLEVIRGIAEQTNLL 402

Query: 389 ALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEKMVAGIQNGTGEAVQSMQQS 448
           ALNAAIEAARAGEAGRGFAVVADEVR+LA RTA S  EI +++  +Q+G  EAV++++  
Sbjct: 403 ALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESG 462

Query: 449 NQRTQTTLEMARAAGVALEQITQSISLINERNLVIASASEEQAQVSREVDRNLVNIRDLA 508
            QR+Q   E    AG  L++ITQ++  I + N  IA+A+EEQ  V+ ++ RNL+ I  +A
Sbjct: 463 QQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQTSVAEDISRNLIEITRIA 522

Query: 509 TQSAAGANQTSAASHELSRLAVDLNGMVAR 538
           T +      T  A   L  L+  L  + +R
Sbjct: 523 TANQEAVQHTEQAGQRLHGLSGQLGEVTSR 552



 Score = 33.1 bits (74), Expect = 3e-05
 Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 14/176 (7%)

Query: 216 TPLRKAVEVAETIAGGN----LSKAIEDDGKDEPARLLGALATMQANLRQTIQHIAGSAT 271
           T + K +EV   IA       L+ AIE     E  R     A +   +R   Q  A S  
Sbjct: 383 TRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGR---GFAVVADEVRSLAQRTAASIA 439

Query: 272 QLASAAEELSAVTEEASKGL---QQQNNE----IDQAATAVNEMTAAVEEVARNAVSTSE 324
           ++    E + +   EA K +   QQ++ E    ++QA   +  +T AVE +       + 
Sbjct: 440 EIHQIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIAT 499

Query: 325 ASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAMIEGLATQGRDIGKVLDVIRA 380
           A+ +    A +    ++E         + VQ+T    + L      +G+V   + A
Sbjct: 500 AAEEQTSVAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLSGQLGEVTSRLSA 555