Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  563 bits (1452), Expect = e-165
 Identities = 306/539 (56%), Positives = 403/539 (74%)

Query: 1   MSLRQLNIAPRAFLGFAFIALLVILLGVFAVNRMAQIRQSSVEMTATQLPSVTSLGVITE 60
           MSLR +NIAPRA LGFA I LL++ LG+F++ +M  IRQ+ V +    +PS+  L  +T 
Sbjct: 1   MSLRNMNIAPRALLGFALIGLLMLGLGIFSLVQMGNIRQAGVAIEQVSVPSIKILDELTA 60

Query: 61  NVLRLRILSFRVLVNREPASLQEAETRIGVLVDKVKTAQASYAALPAGPEEAALYKTFMV 120
             LR+R LS+R+L+NREPA+ ++    +     ++  A+ +Y  +    +E A +  +  
Sbjct: 61  LNLRMRTLSYRLLLNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADEQAAFDQYGQ 120

Query: 121 TLDNYLKAQADMLALSKQGKVDEMRALINSRIKDGTDQMGEQLNKLIAINVADAKTADTD 180
            L+ Y + ++ M  LS+  ++DE+R L+N  +   ++Q+ + ++ L+ IN    +  +  
Sbjct: 121 LLNQYRQLESRMRTLSQADRLDELRDLLNRDLLANSEQINKVMDTLVRINTDQTRATNEK 180

Query: 181 AGQSYDGAITGVIAVSVAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGNLSKAIEDD 240
           A   Y GA   VI + VAA +LT   A+LLTRSIV P+ +A++ AE +A G+L+  I  +
Sbjct: 181 AANQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVIRAE 240

Query: 241 GKDEPARLLGALATMQANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQ 300
           G DE ARLL A+A MQ  LR T+Q IAGSATQLASAAEEL+AVT+E+++GLQQQNNEI+Q
Sbjct: 241 GTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQ 300

Query: 301 AATAVNEMTAAVEEVARNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAM 360
           AATAV EMT+AVEEVARNAVSTSEASS+++++  +GRD V+ETVGAI+ M+ DVQ TA +
Sbjct: 301 AATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKL 360

Query: 361 IEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420
           I  LA Q RDIGKVLDVIR +A+QTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT
Sbjct: 361 ITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420

Query: 421 AQSTQEIEKMVAGIQNGTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERN 480
            QST EIE+M+  IQ GT EAV+SM+ S +R ++TL +AR AG+AL+ I  +++ INERN
Sbjct: 421 QQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERN 480

Query: 481 LVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARF 539
           LVIASA+EEQAQV+REVDRNLVNI DL+ QSA GA+QTSAAS ELSRLAVDLNG+VARF
Sbjct: 481 LVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARF 539