Pairwise Alignments

Query, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 6e-30
 Identities = 86/274 (31%), Positives = 127/274 (46%), Gaps = 5/274 (1%)

Query: 13  LLKTFEALHDESSASRAALRLGVTQSAVSAGLRRLREVYGDQLFVRTGRGLAPTLRANQL 72
           LL+ F+ L+   S +RAA +LG +Q  +S  L RLRE   D LFVRT  G+APT RA+QL
Sbjct: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71

Query: 73  KPVISEALERCRQSLAMVDPDNQHYQGRSVVLGLSDDFEIAYGRRLIEAIAQRAPRLRVI 132
                E LE  R+  A           R   L +SD   I     ++  +   AP +R+ 
Sbjct: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLE 131

Query: 133 FRQTHSQIVAGALLDRTLDLAITAGGFAQGRLSRQVLGEGDYRCLVDSDQA----SISLE 188
             +        AL     DLAI    +  G + +QVL E D+ CL +         +SLE
Sbjct: 132 AARIDGN-TESALESGEADLAIGFVPWLGGGMYQQVLFEQDWVCLSNPQHPRLGDGMSLE 190

Query: 189 EFVTREHVLVSSGGFIGITDEGLAALGLSRQVCASTSHFAALPFLLKGSQAVATIPGHAA 248
            +    HV +S G    + + GLA  G+ R++      F  L  ++  +  + T+P H  
Sbjct: 191 RYRAEGHVQISFGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTLPRHIG 250

Query: 249 QAIAQMTGLRVLPCPLALPRYPVELGWRTQAQLD 282
           Q +A M GL+V  CP  +  + V+  W  +   D
Sbjct: 251 QTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQD 284