Pairwise Alignments

Query, 331 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 389 a.a., putative transmembrane sensor from Variovorax sp. SCN45

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 77/241 (31%), Positives = 117/241 (48%), Gaps = 18/241 (7%)

Query: 87  AVAAAICLVALPLAAFTGWEAGWLPSSYERFDAT-HGLR-QVTLGDGSQVELNLGTQLVY 144
           A AA    V L    F GWE      +Y    AT  G + QV L DGS + L+  T++  
Sbjct: 127 AWAAPALAVLLLAGGFFGWEFWQRQPTYSAQHATARGQQIQVQLPDGSVMRLDTLTRMDV 186

Query: 145 SNYKDQRRVTLKKGEAFFKVSHDTAHPFIVHAGEGQVRVTGTQFNVWKY------EDQVR 198
           + Y+ +R V L +G+A F+V+HD + PF V AG  ++ V GT+F+V +Y      +  VR
Sbjct: 187 ALYRHRREVRLSEGQAVFQVAHDASRPFQVLAGPLRITVVGTRFSV-RYTAGTLGQSDVR 245

Query: 199 VTLLEGSVQIS--------SDKVHGSVPLTPGMQANYQHGDATPRVRTMSPNDTALAWRQ 250
           V + EG V++            V+  V LT G Q           + T +P+     WR 
Sbjct: 246 VAVEEGRVRVEPIEPSATHDGSVNRRVELTAGEQIASDAQGGLGAI-TPAPSTGIAPWRN 304

Query: 251 GKLILDNLALADALPLINRYLSKPVMLADANTGTIRIGGIYNINEVNNLVPSLPKVLPVY 310
            ++  DN  L  AL    RY +  + + D     +R+ G ++   ++N V +LP+VLPV 
Sbjct: 305 NRVSFDNTPLDQALAEFERYGATRLRVQDPAVAALRLTGTFDPRHLDNFVRALPQVLPVR 364

Query: 311 L 311
           L
Sbjct: 365 L 365