Pairwise Alignments

Query, 331 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  389 bits (1000), Expect = e-113
 Identities = 200/338 (59%), Positives = 238/338 (70%), Gaps = 10/338 (2%)

Query: 1   MTEKSLSEAEYDAITDAAAHWCMRLHAVDCTASERQAFEQWHDAHPLHAFEYAAMLEIWD 60
           M    L+    DAITDAAAHWCMRLHA DCT +ER+AF  W  A P HA EY AMLEIW 
Sbjct: 1   MNHDRLNPNPDDAITDAAAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQ 60

Query: 61  VADHLPRNEPTATVVPFKPR-------RRLRTYAVAAAICLVALPLAAFTGWEAGWLPSS 113
            AD LPR+   ATV+ F P        R  R  A AAAI L  LPLA + GWE GWLP+ 
Sbjct: 61  TADLLPRS---ATVIDFNPPARHAARPRNWRPLASAAAIALAVLPLAGWMGWEQGWLPNH 117

Query: 114 YERFDATHGLRQVTLGDGSQVELNLGTQLVYSNYKDQRRVTLKKGEAFFKVSHDTAHPFI 173
           Y+ F+A   ++ V L DGS V+LNL T+L + NYKDQR+VTLK+GEAFFKV HD++HPFI
Sbjct: 118 YQHFEAGDRMQTVELSDGSTVQLNLHTELTFLNYKDQRQVTLKRGEAFFKVRHDSSHPFI 177

Query: 174 VHAGEGQVRVTGTQFNVWKYEDQVRVTLLEGSVQISSDKVHGSVPLTPGMQANYQHGDAT 233
           V AG GQ RVTGTQFNVWKY+DQV+VTL+EGSV +SS+   G   L PGMQA+Y  GD  
Sbjct: 178 VRAGSGQTRVTGTQFNVWKYQDQVKVTLVEGSVLVSSEGSAGGYRLGPGMQASYHKGDFE 237

Query: 234 PRVRTMSPNDTALAWRQGKLILDNLALADALPLINRYLSKPVMLADANTGTIRIGGIYNI 293
           P++        +LAWR GKL+LDNL+L  ALP+INRYL  P++LADA+TG IRI GIYN 
Sbjct: 238 PQLEQSDDYGNSLAWRSGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGIYNT 297

Query: 294 NEVNNLVPSLPKVLPVYLTQNQDGNPVLNSIPRKAPKG 331
            EV  LV +LPKVLPVYLT+++DG+ VLN I     KG
Sbjct: 298 REVGRLVNNLPKVLPVYLTRSKDGSTVLNRISPPPGKG 335