Pairwise Alignments

Query, 441 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 441 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  737 bits (1902), Expect = 0.0
 Identities = 365/441 (82%), Positives = 390/441 (88%)

Query: 1   MGGPPVQRRLLVVDPCDDCHGLLPGLRAAGWEVDSCTLEGVGDRSCDVGLLRLQPYHLER 60
           M  P  QRRLL+VDPCDDCH LLPGLR AGW+VDSC L    D +CDVGLLRLQ  HL  
Sbjct: 1   MQQPAAQRRLLIVDPCDDCHRLLPGLRNAGWDVDSCMLGAALDHTCDVGLLRLQASHLRH 60

Query: 61  PEAVKELISRSGTEWIAVLSQDVLRLQNVGDFVCEWFFDFHTLPFDVARVQVTLGRAFGM 120
           P+AVK++I RS TEWIAVLS D LR+   GDFVCEWFFDFHTLPFDV+RVQVTLGRAFGM
Sbjct: 61  PDAVKDMIKRSNTEWIAVLSADQLRMPAFGDFVCEWFFDFHTLPFDVSRVQVTLGRAFGM 120

Query: 121 ARLRGKGYTAVDEPEHELLGDSRPIRELRKLLSKLAPTESPVLIRGDSGTGKELVAKTLH 180
           ARLRGKG   VDE  HELLG+SRPIRELRKLL KLAPTESPVLIRG+SGTGKELVA+TLH
Sbjct: 121 ARLRGKGAVKVDEATHELLGESRPIRELRKLLGKLAPTESPVLIRGESGTGKELVARTLH 180

Query: 181 RQSQRHAKPFVAINCGAIPEHLIQSELFGHEKGAFTGAHQRKIGRIEAANGGTLFLDEIG 240
           RQSQR  +PF+AINCGAIPEHLIQSELFGHEKGAFTGAHQRK GRIEAA+GGTLFLDEIG
Sbjct: 181 RQSQRSEQPFIAINCGAIPEHLIQSELFGHEKGAFTGAHQRKTGRIEAADGGTLFLDEIG 240

Query: 241 DLPMELQANLLRFLQEKQIERVGGSQPIPVDVRVLAATHVDLEAAVEKGTFREDLYYRLN 300
           DLP+ELQANLLRFLQEK IERVGGSQPIPVDVRVLAATHVDLE A+E+G FREDLYYRLN
Sbjct: 241 DLPLELQANLLRFLQEKHIERVGGSQPIPVDVRVLAATHVDLERAIEQGRFREDLYYRLN 300

Query: 301 VLQVVTAPLRERHGDIAMLANHFSRFYSQETGRRPRSFSDDALVAMGEHAWPGNVRELAN 360
           VLQVVTAPLR+RHGD++MLANHF+ FYS ETGRRPRSFSD AL AMG H WPGNVRELAN
Sbjct: 301 VLQVVTAPLRDRHGDLSMLANHFAHFYSVETGRRPRSFSDHALAAMGRHDWPGNVRELAN 360

Query: 361 RVRRGLVLAEGRQIEAVDLGLQGQQAISPPMATLEDYKHRAERQALCDVLNRHSDNLSVA 420
           RVRRGLVLAEGRQIEA DLGLQ       P+ TLE+YK RAERQALCDVLNRHSDNLSVA
Sbjct: 361 RVRRGLVLAEGRQIEAQDLGLQLLDPEQQPLGTLEEYKQRAERQALCDVLNRHSDNLSVA 420

Query: 421 ARVLGVSRPTFYRLLHKHQIR 441
           A+VLG+SRPTFYRLLHKHQIR
Sbjct: 421 AKVLGISRPTFYRLLHKHQIR 441