Pairwise Alignments

Query, 238 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 236 a.a., Transcriptional regulator, YafY family from Variovorax sp. SCN45

 Score =  144 bits (364), Expect = 1e-39
 Identities = 87/211 (41%), Positives = 118/211 (55%), Gaps = 4/211 (1%)

Query: 1   MSRTTRLLTLLQALRGKKRPVTAAVLAAQLEVSERTLYRDIAELTALGAPIFGEAGVGYV 60
           M R  RL  ++Q +RG+ R  TAA LA +LEVSERT+YRD+A+L   G PI GEAG+GY 
Sbjct: 1   MRRADRLFQIVQLIRGR-RLTTAAFLAQRLEVSERTVYRDVADLQHQGVPIEGEAGMGYR 59

Query: 61  LRSGLFLPPLMLNAEETEAIVLGLRYVDQRGDDVLSRAAANALAKIADVLDPAAQEALRN 120
           L +G  LPPLM   +E  A+V   R      D  L+R     L KI  VL PAA+ +   
Sbjct: 60  LGAGFELPPLMFTQDEASALVAAARLAQSWVDPALARDIETGLGKILSVLPPAARVSAEA 119

Query: 121 PTVLPGPPGFGY-PENRVPLNVFREAIRSQAKLQIDYADASQTQSQRLIWPLALGFLNEV 179
             +    P  G  P  R  L   REA++S  KL++ Y D S   S+R + PL   +  +V
Sbjct: 120 LALY--APALGLEPALRARLQTLREAVQSHNKLRLAYRDVSGDASERTVRPLGCFYWGKV 177

Query: 180 RVIVAWCELRGAYRTFRTDRVASAQPHGERY 210
             + AWCELR  +R FR DR+ + +   +R+
Sbjct: 178 WTLSAWCELRNDFRGFRLDRMEAIELLSDRF 208