Pairwise Alignments

Query, 238 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 226 a.a., Predicted transcriptional regulator from Enterobacter asburiae PDN3

 Score =  129 bits (323), Expect = 6e-35
 Identities = 80/197 (40%), Positives = 109/197 (55%), Gaps = 2/197 (1%)

Query: 3   RTTRLLTLLQALRGKKRPVTAAVLAAQLEVSERTLYRDIAELTALGAPIFGEAGVGYVLR 62
           R  RL  ++Q LRG+ R  TAA LA +L VSERT+YRDI +L+  G P+ GEAG GY L 
Sbjct: 4   RADRLFQIVQILRGR-RLTTAAHLADRLGVSERTVYRDIRDLSLSGVPVEGEAGSGYRLM 62

Query: 63  SGLFLPPLMLNAEETEAIVLGLRYVDQRGDDVLSRAAANALAKIADVLDPAAQEALRNPT 122
           SG  LPPLML   E+EA+++ +R +   G + LSR   +A  K+  +L P         T
Sbjct: 63  SGFDLPPLMLTNRESEALIVAIRLLKTWGGESLSRELESAQEKVLAIL-PEESRRKAEQT 121

Query: 123 VLPGPPGFGYPENRVPLNVFREAIRSQAKLQIDYADASQTQSQRLIWPLALGFLNEVRVI 182
            +  P       +R   +   +AI +Q  L + Y D +   S+R + PL L F  E  ++
Sbjct: 122 RIYAPDFCMQSHSRSDFDRIHQAISAQRVLALHYRDEAGQLSKREVQPLGLFFWGERWLL 181

Query: 183 VAWCELRGAYRTFRTDR 199
            AWCE R  YR FR DR
Sbjct: 182 AAWCERRDDYRCFRLDR 198