Pairwise Alignments

Query, 355 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 319 a.a., ribose ABC transporter, periplasmic ribose-binding subunit from Pseudomonas putida KT2440

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 98  LRMAQGSGVKLLIVNNALTADQVQLLNARNDADVMGSMVANDEQAGYLMLTDLLRQHGPA 157
           ++ A   GV ++ ++N L  D   LL ++    +    V  D + G  ++ D L      
Sbjct: 110 VKKAMDQGVVVINIDNRLDPD---LLKSKG---ISVPFVGPDNRKGARLVGDYLASQ-KL 162

Query: 158 KPGESIDLLAFSGTKTTPAAQLREKGLRRALAEHPEVRLRQLVSGEWSRQRAFEQAVLLF 217
           K G+ + ++   G  TT  AQ R  G + A+ +  ++++  + SG W   +    A  + 
Sbjct: 163 KAGDQVGII--EGVSTTTNAQQRTAGFKDAM-DAAQMKIVSVQSGNWEIDKGNAVAASML 219

Query: 218 KRYPQTALVWSANDEMALGAMQALQDSGRVPGQEVL-FSAVNSSPQILQARLDGR-LSTL 275
             YP    + + ND MALGA+ A++ +G+    +V+ +  +N+   +L+   DGR L+TL
Sbjct: 220 NEYPDLKALLAGNDSMALGAVSAVRAAGKTGQVQVVGYDNINAIKPMLE---DGRVLATL 276