Pairwise Alignments

Query, 355 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., ribose ABC transporter substrate-binding protein RbsB from Escherichia coli ECRC62

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 29/270 (10%)

Query: 12  LGSAYGAMAHATSVVFLNPGMSTETFWVSYAQFMQAGAKDLGLHLRVRYSERDTRNTLNQ 71
           L +   A A A   + L        F+VS     Q  A  LG +L V  S+ +    L  
Sbjct: 15  LSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELAN 74

Query: 72  AREALQGSERPDYLVLVN--EQYVAPQILRMAQGSGVKLLIVNNALTADQVQLLNARNDA 129
            ++    + R   ++L+N  +       ++MA  + + ++ ++   T  +V    A ++ 
Sbjct: 75  VQDL---TVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKGEVVSHIASDN- 130

Query: 130 DVMGSMVANDEQAGYLMLTDLLRQHGPAKPGESIDLLAFSGTKTTPAAQLREKGLRRALA 189
            V+G  +A D  A               K GE   ++   G   T AA+ R +G ++A+A
Sbjct: 131 -VLGGKIAGDYIA--------------KKAGEGAKVIELQGIAGTSAARERGEGFQQAVA 175

Query: 190 EHPEVRLRQLVS--GEWSRQRAFEQAVLLFKRYPQTALVWSANDEMALGAMQALQDSGRV 247
            H   +   L S   ++ R +       L   +P    V++ NDEMALGA++ALQ +G+ 
Sbjct: 176 AH---KFNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGK- 231

Query: 248 PGQEVLFSAVNSSPQILQARLDGRLSTLVA 277
              +V+    + +P   +A  DG+L+  +A
Sbjct: 232 --SDVMVVGFDGTPDGEKAVNDGKLAATIA 259