Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 290 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score =  241 bits (615), Expect = 1e-68
 Identities = 141/284 (49%), Positives = 173/284 (60%), Gaps = 14/284 (4%)

Query: 1   MDRYVVFGNPIGHSKSPLIHRMFAEQTGEQLDYSTLLAPLEDFS-------GCAREFFQQ 53
           MD Y V GNP+ HS+SP IH  FAE  G+Q+DY   L P+  F+         A E    
Sbjct: 1   MDLYCVIGNPVEHSRSPRIHARFAELCGQQMDYGRRLVPIGAFAEGIAAFRAEAAERGDT 60

Query: 54  GRGANVTVPFKEDAYRLANSLTERAQRAGAVNTLSKLADGSLLGDNTDGAGLVRDLTVNA 113
            RG N+TVPFK +A  LA   +ERA  A AVNTL   ADG +  DNTDG GLV D+  NA
Sbjct: 61  ARGCNITVPFKFEAAALAQHTSERATLAQAVNTLRFEADGGIHADNTDGIGLVNDIVRNA 120

Query: 114 GLNLQGKRILLLGAGGAVRGALEPLLAEQPASLIIANRTVEKAEML-----AELFDDLGP 168
           G+ LQGK +LL+GAGGA  G L PLL    A +++ANRTV+KA  L     A        
Sbjct: 121 GVPLQGKALLLIGAGGAAAGVLGPLLDAGAARVVVANRTVDKAIELVRRHAAVALRHGAS 180

Query: 169 VSASGFDWLREPVDVIINATSASLSGDVPPIASSLIEPGKTFCYDMMYAKEPTAFCRWAT 228
           + A   D +    DV++NAT++SL+GD  P+++ ++ PG     DMMY      F  WA 
Sbjct: 181 LEAWALDKVPGAFDVVVNATASSLAGDAVPVSADVLRPG-GLAVDMMYGPAAAGFMAWAE 239

Query: 229 EHGASVAMDGLGMLVEQAAEAFYLWRGVRPDSAPVLAELRRQLA 272
            HGA VA DGLGMLVEQAAE+F +WRGVRP SA VLAELR  LA
Sbjct: 240 AHGA-VARDGLGMLVEQAAESFEIWRGVRPPSAQVLAELRSSLA 282