Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 307 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 62.8 bits (151), Expect = 9e-15
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 11/250 (4%)

Query: 4   YVVFGNPIGHSKSPLIHRMFAEQTGEQLDYSTLLAPLEDFSGCAREFF--QQGRGANVTV 61
           Y++ G+P+ + + P +     E+ G       +  P+ DF+   +  F  +  RG  +  
Sbjct: 12  YLIPGDPVRNVRLPRMFNAVFERFGIDAVLLPMQVPVRDFAVFFKSAFLARNVRGMVIAP 71

Query: 62  PFKEDAYRLANSLTERAQRAGAVNTLSKLADGSLLGDNTDGAGLVRDLTVNAGLNLQGKR 121
           P K     L +      + AG+VN + +     L GD  DG GL+  L  +  +  +GKR
Sbjct: 72  PHKPLVVDLLDGCGLFGRVAGSVNVVRRTEGDQLEGDLFDGEGLIGALD-HCNIPFRGKR 130

Query: 122 ILLLGAG---GAVRGAL-EPLLAEQPASLIIANRTVEKAEMLAELFDDLGPVSASGFDW- 176
           +L++GAG    A+  AL E  +      +   ++   KA  +A   D     +    D  
Sbjct: 131 VLIVGAGVSAAAIGVALAEGGVVNGATHIAFYDKAAGKAAGVAAKLDAFFDATVVAVDSN 190

Query: 177 LREPVDVIINATSASL-SGDVPPIASSLIEPGKTFCYDMMYAKEPTAFCRWATEHGASVA 235
             E  D+++NAT   L  GD  P+  + ++      +D++   +PT   R A   G + A
Sbjct: 191 APEGYDLVVNATPLGLVEGDALPVDVARMDDHAAL-FDILLRNQPTPLVRAARARGLN-A 248

Query: 236 MDGLGMLVEQ 245
             G  ML++Q
Sbjct: 249 QAGFEMLIQQ 258