Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 289 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score = 73.2 bits (178), Expect = 6e-18
 Identities = 85/276 (30%), Positives = 118/276 (42%), Gaps = 25/276 (9%)

Query: 6   VFGNPIGHSKSPLIHRMFAEQTGEQLDYSTLLA-------PLEDFSGCAREFFQQG-RGA 57
           + G  I  SKSP +H    E     LDYS  L        P         E   +G  G 
Sbjct: 11  LIGADIQLSKSPALH--MREGAAHGLDYSYELVDVTARKLPQSSLPALLDELEARGFAGT 68

Query: 58  NVTVPFKEDAYRLANSLTERAQRAGAVNTLSKLADGSLLGDNTDGAGLVRDLTVNAGLNL 117
           N+T PFK+      + L++ A+  GAVNT+    DG  +G NTD  G      V    + 
Sbjct: 69  NITHPFKQAVIPHLHELSDDARMLGAVNTV-VFRDGRRIGHNTDWYGFYESF-VRGLPDA 126

Query: 118 QGKRILLLGAGGAVRGALEPLLAEQPASLIIANRTVEKAEMLAELFDDLGPVSASGFDW- 176
           +  R LL+GAGGA        L      L I +R   +AE LA   D+L      G  + 
Sbjct: 127 KRDRALLVGAGGAGVAVAHAALKLDIIRLDIFDRDFPRAERLA---DELNARFGEGRAFA 183

Query: 177 LREPVDV------IINATSASLSGDV-PPIASSLIEPGKTFCYDMMYAKEPTAFCRWATE 229
           +++P D       +I+AT   +      P+A+ LIE  K +  D++Y    T     A  
Sbjct: 184 VKDPADSLPFADGLIHATPMGMPAHPGMPVAAELIEQ-KHWVADIVYMPLVTELLATAAS 242

Query: 230 HGASVAMDGLGMLVEQAAEAFYLWRGVRPDSAPVLA 265
            G    + G GM V QA  AF L+ G  PD+  + A
Sbjct: 243 KGCR-TLPGGGMTVFQAVGAFRLFCGREPDAKRMTA 277