Pairwise Alignments

Query, 609 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  520 bits (1340), Expect = e-152
 Identities = 263/571 (46%), Positives = 361/571 (63%), Gaps = 15/571 (2%)

Query: 34  KYPAKFTHFDWVNPAAPKGGTLRVMAFGTFDTLNPYTFKGSSPVSTPNFLQYGVNELNEP 93
           KYPA F HFD+VNP APKGGT R  +FG FD+LNP             F+  GV   N  
Sbjct: 39  KYPADFKHFDYVNPDAPKGGTFRQSSFGGFDSLNP-------------FINKGVAAENIG 85

Query: 94  LMVGTGLYAPSGDEPTSSYGLIAQSVEYSEDRSWVVFNLRPEARFHDGKPITAYDVAFSY 153
           ++  T L   S DEP + YGL+A  +E + D SWV F LRPEARFHDG P+ A DV F++
Sbjct: 86  IIYDT-LMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPMRADDVVFTF 144

Query: 154 RTLLTEGHPQYRTNLQEVARVDILNRHRIRFVFKRAGNPLLILRLGELPVLPQHYWKNRD 213
             L+ +G P YR    +VA V      ++ F FK   N  L L LG+LPVLP+H+++NR+
Sbjct: 145 NALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNRELPLILGQLPVLPKHWYENRE 204

Query: 214 FKATTFEPPLGSGPYRISKVTPGRQLVFERVKNYWGKDLPVNRGFYNYDKVEVEFYRDSD 273
           F     E PLGSGPY+++KV  GR + +ERVK+YW KDLP+NRGFYN+D +  + YRD+ 
Sbjct: 205 FNRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPINRGFYNFDAMTFDAYRDTT 264

Query: 274 VAFEAFKAGEFDIYIEHQAKNWANGYNFPAVNRGDVIKAQIAHQIPTQSQGLFMNSRRPI 333
           VA EA KAG FD  +E  AKNWA  YN PAV  G +IK ++ +  PT  QG   N RRP+
Sbjct: 265 VALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELPNGNPTGMQGFIFNIRRPV 324

Query: 334 FSQAKVREALGLMFDFEWTNRTLFSSAYKRTLSYYPNSEFSATGVPTGHEWLMLSPYRDQ 393
           F   +VR+AL L+ D+EWTN+ LF+ AY RT SY+ NSE +A G+P+ +E  +L P R +
Sbjct: 325 FQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEMAARGLPSPNELKILEPLRGK 384

Query: 394 LPASLFTQPFSLPQTDGRGIPRETMRRALALLGDAGWKLSGQRLLNKDGQPLRFEILLVN 453
           +P  +FT+ F  P +DG G+ RE  R+A  LL +AGWK+   ++++  G+P   E LL  
Sbjct: 385 VPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDDKMVDAQGKPASIEFLLAQ 444

Query: 454 PNLERILQPYVENLISIGIDARLRTVDRAQYKQRLDQFDFDMILITLNQTLSPGLEQWQY 513
              ERIL P+  NL  +GI+  +R VD +QY  RL   D+DMI+    Q+ SPG EQ ++
Sbjct: 445 TEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRDYDMIVGGYPQSNSPGNEQREF 504

Query: 514 FHSSQAAIKGSKNYAGIANPIVDHLLEQLLAAKTREEQLAAGRALDRVLLWQHYSIPNWY 573
           + S+ A   GS+N+ G+ +P +D L++QL+ A +R+  +   RALDRVLLW +Y IPNW+
Sbjct: 505 WSSAAADNPGSRNFIGLRDPAIDQLVDQLINADSRQSLIDHCRALDRVLLWGYYVIPNWH 564

Query: 574 LNYHRLAYRNRFAFV-TTPPYSLGLSAWWLK 603
           +   R+AY N       +P Y +G+  WW+K
Sbjct: 565 IKTWRVAYWNHIGHPNVSPKYDIGIDTWWIK 595