Pairwise Alignments

Query, 609 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 642 a.a., putative ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  424 bits (1090), Expect = e-123
 Identities = 242/603 (40%), Positives = 336/603 (55%), Gaps = 28/603 (4%)

Query: 8   LISLALSFGANAAITESHGYTQFGVL-KYPAKFTHFDWVNPAAPKGGTLRVMAF--GTFD 64
           L+   + F   AA T  H  T +G   +Y A F HFD+VNP+APKGG LR  A   G FD
Sbjct: 39  LVFSCIGFTVQAAPT--HALTVYGEAPRYAASFRHFDYVNPSAPKGGILRRSAIEIGQFD 96

Query: 65  TLNPYTFKGSSPVSTPNFLQYGVNELNEPLMVGTGLYAP----SGDEPTSSYGLIAQSVE 120
            + PY  KG            GV+E++  L      YAP    S DEP + YGLIA+ +E
Sbjct: 97  HILPYIDKG-----------IGVSEVDGLL------YAPLAVRSYDEPYTVYGLIARRME 139

Query: 121 YSEDRSWVVFNLRPEARFHDGKPITAYDVAFSYRTLLTEGHPQYRTNLQEVARVDILNRH 180
              +  W+ F++ P A F DG+P+ A DV F++  L+++G  +YRT   +VARV +   H
Sbjct: 140 RGPNDEWLRFDIDPRATFADGRPVRAEDVRFTFDLLMSKGSLKYRTQFADVARVTVERLH 199

Query: 181 RIRFVFKRAGNPLLILRLGELPVLPQHYWKNRDF-KATTFEPPLGSGPYRISKVTPGRQL 239
            +RF  K      L L L  LPV+P+H  + RDF     F+ P+GSGPYRI ++  GR +
Sbjct: 200 SVRFDLKPEHGRTLALDLASLPVMPEHDLQQRDFANGAGFDKPVGSGPYRIGRIDNGRSI 259

Query: 240 VFERVKNYWGKDLPVNRGFYNYDKVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGY 299
            FER   +W +DLP +RG YN+DK+ +E++ D++VA +  K G +D   E  A  +  GY
Sbjct: 260 TFERDPAWWARDLPASRGRYNFDKLRIEYFGDTEVARQVLKGGGYDYNREFSATAYTLGY 319

Query: 300 NFPAVNRGDVIKAQIAHQIPTQSQGLFMNSRRPIFSQAKVREALGLMFDFEWTNRTLFSS 359
           N   ++ G + +A +    P  +QG   N  +P F   +VR+ALG+++DFEW+NR +  +
Sbjct: 320 NGAQLDDGRLQRAHLGPAKPQVAQGFVFNLDQPQFKDRRVRQALGMLWDFEWSNRQMMRN 379

Query: 360 AYKRTLSYYPNSEFSATGVPTGHEWLMLSPYRDQLPASLFTQPFSLPQTDGRGIPRETMR 419
            Y R  S + N+  +A  +P   E  +L+P R Q+P  +FT  F+ P TDG GI R+   
Sbjct: 380 LYIRQQSVFSNTPLAARQLPDAGELKLLAPLRGQVPDEVFTTVFTAPVTDGSGIIRQQQL 439

Query: 420 RALALLGDAGWKLSGQRLLNKDGQPLRFEILLVNPNLERILQPYVENLISIGIDARLRTV 479
           +ALALL  AGW   G RL+N  G PL F  L     LER+L P+  NL  IG+   +R V
Sbjct: 440 QALALLEQAGWHPEGDRLVNSQGTPLAFTFLNGQAGLERLLLPWKRNLAQIGVTLNIRNV 499

Query: 480 DRAQYKQRLDQFDFDMILITLNQTLSPGLEQWQYFHSSQAAIKGSKNYAGIANPIVDHLL 539
           D AQY  RL   D+DMI+     TLSPG E + YF S+ A   GS N   + +P VDHL+
Sbjct: 500 DSAQYVNRLMARDYDMIVTGYPVTLSPGAELYNYFGSAAAHDPGSNNLMVLQDPAVDHLI 559

Query: 540 EQLLAAKTREEQLAAGRALDRVLLWQHYSIPNWYLNYHRLAYRNRFAF-VTTPPYSLGLS 598
           + L+ A T+ + L    ALDRVL W +Y IPN+Y       + NRF        Y  GL 
Sbjct: 560 DGLVRADTQADMLRHAHALDRVLQWNYYWIPNYYPPGSSTVWWNRFGLPKVQATYDEGLD 619

Query: 599 AWW 601
            WW
Sbjct: 620 TWW 622