Pairwise Alignments

Query, 610 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 94/433 (21%), Positives = 165/433 (38%), Gaps = 81/433 (18%)

Query: 100 LVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVVFTFQELIKEGSPIYRTYY----- 154
           L+A +++++ D     F LR    F +G  + A+DV +T++  +   +  +R        
Sbjct: 70  LLAREVKRSDDGMTYTFTLRDRVHFQNGATLTAQDVKWTWERYLNPKTQ-WRCLAEFDGR 128

Query: 155 --ADVDEVVAEDPLKVLFKFKRTNNRELPLIL----GQLPVLPKHWWATRDFAKGNLEVP 208
             A +  +   DPL V+F   + +   L  +     G   +L     A    A G+ + P
Sbjct: 129 GGAKITGIDTPDPLTVVFHLDQPSGLFLASMARPDCGGSGILHPDSLA----ADGSWKAP 184

Query: 209 LGSGPYKVAEVKAGRMIRYERVKDYWAKDLPITQGFYNFDNRITDYYR-----DSTVSLE 263
           +G+GP+ + E K G+ +   R KDY  +D     GF      + D  R     D + +  
Sbjct: 185 IGTGPFSLGEWKPGQYVVLSRFKDYSPRDDAGPDGFTGKKTALVDAVRFMVIPDPSSAKA 244

Query: 264 ALKAGQFDYWLEFSAKNWANAYNIPAVAQGRLIKEEIPNGNPTGMQGFVFNMRKPMFQDV 323
           AL +   D     SA +     + P V        +I       + G +F    P+ +DV
Sbjct: 245 ALMSNNIDLLPNVSASDAQELKSTPGV--------QISFSPIMAICGLLFQTNDPLLKDV 296

Query: 324 RVRKAISLLLDFEWSNKQLFNGAYTRTRSYFENSEMAATGLPGPDELAILEPLRGKIPPE 383
           R+R+AI+  LD+      L NG                            EP    IP  
Sbjct: 297 RIRQAIAHSLDYGQMVTALSNGT--------------------------SEPNNSAIPQ- 329

Query: 384 VFTQAFEPSKTDGSGMIRTQQREAYQLLQEAGWRIVDDKMVDTSGKPVTIEFLLAQTEFE 443
             T  F  S T   G  R   +EA +LL+EAG+           G+P+ +      ++  
Sbjct: 330 --TSPFY-SATAKQG-YRYDPQEAQRLLKEAGYH----------GQPIKMIVNKRYSQMF 375

Query: 444 RILLPFKRNLADLGIDLVIRRVDVSQFINRIRSRDFDMLVGSFPQSTSPG---------- 493
            + L  +      G+++ +  ++    + R +S ++ M+  S+     P           
Sbjct: 376 DMGLLSQAMAVASGLNIQMETLEWGTQLERYQSGNYQMMAFSYSSRLDPATSFDSLMGDK 435

Query: 494 -NEQREFWKSSSA 505
             E R+ W +  A
Sbjct: 436 TKEPRKVWDNPQA 448