Pairwise Alignments

Query, 610 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 542 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 77.8 bits (190), Expect = 1e-18
 Identities = 96/422 (22%), Positives = 167/422 (39%), Gaps = 62/422 (14%)

Query: 116 FYLRPEARFHDGHPIRAEDVVFTFQELIKEGSPIYRTYYADVDEVVAEDPLKVLFKFKRT 175
           F LR   R+HDG P  + DV  +   L+K+  P  R  ++ V EV   D    +      
Sbjct: 107 FTLRRGVRWHDGKPFTSADVAHSIG-LLKQYHPRGRATFSSVAEVRTPDAYTAVLVL--- 162

Query: 176 NNRELPLILGQL-----PVLPKHWWAT-RDFAKGNLEVPLGSGPYKVAEVKAGRMIRYER 229
            ++ +P +L  L     P++P+H + + +  A      P+G+GP+   E   G  + YER
Sbjct: 163 -SKPVPYLLTALSASESPIVPRHLYESGKADANPANNAPIGTGPFVFKEWVRGSHVTYER 221

Query: 230 VKDYWAKDLPITQGFYNFDNRITDYYRDSTVSLEALKAGQFDYWLEFSAKNWANAYNIPA 289
             DYW    P        D  I  +  D+     A++ G+    +  S        ++  
Sbjct: 222 NPDYWDNPKPYV------DRLIVRFIPDAAARAAAIEKGE----VHLSPGTPVPLGDVER 271

Query: 290 V-AQGRLIKEEIPNGNP--TGMQGFVFNMRKPMFQDVRVRKAISLLLDFEWSNKQLFNGA 346
           + A+  L+ E  PNG      +    FN+  P  QD+RVR+AI+  ++ +   K ++ G 
Sbjct: 272 LRAKPNLVFE--PNGYQYINNVSRVEFNLENPALQDLRVRQAIAHAINRQVVQKTVWYG- 328

Query: 347 YTRTRSYFENSEMAATGLPGPDELAILEPLRGKIPPEVFTQAFEPSKTDGSGMIRTQQRE 406
                            +PGP   A+ +     +P          +  D +G +R +   
Sbjct: 329 -------------QGQLIPGPVHPALRKFYVPDLPVLPHDVKRAEALLDAAGFVRGKAGG 375

Query: 407 AYQLLQEAGWRIVDDKMVDTSGKPVTIEFLLAQTEFERILLPFKRNLADLGIDLVIRRVD 466
             +L             +   G   T E+L             K++L  +GI++ I   D
Sbjct: 376 NLRLKLAV-------VPISNEGGQRTAEYL-------------KQSLGRIGIEVTIHSQD 415

Query: 467 VSQFINRI-RSRDFDMLVGSFPQSTSPG-NEQREFWKSSSADKPGSRNYMGLKDPAIDQL 524
            + ++ R+   R FD+ V     +  P    QR +W  +        N  G  +P +D+L
Sbjct: 416 FATYVRRVYADRAFDLHVSVMSNTFDPTVGIQRLYWSKNFKKGLPFSNGSGYSNPEVDRL 475

Query: 525 VE 526
           +E
Sbjct: 476 LE 477