Pairwise Alignments

Query, 610 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  984 bits (2545), Expect = 0.0
 Identities = 466/603 (77%), Positives = 534/603 (88%), Gaps = 4/603 (0%)

Query: 8   LLGGLLLCTA---AQAAPQHALTLYNEPPKYPADFKHFDYVNPDAPKGGTFRESAMGGFD 64
           L G LLL      A AAPQHALTLY+EPPKYPADFKHFDYVNPDAPKGGTFR+S+ GGFD
Sbjct: 10  LAGSLLLACLSLPALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQSSFGGFD 69

Query: 65  SLNPYISKGVPADNLGLIYDTLAMQSLDEPITEYGLVAGKIEKAPDNSWVRFYLRPEARF 124
           SLNP+I+KGV A+N+G+IYDTL  QS DEP TEYGLVAGKIEKAPDNSWVRFYLRPEARF
Sbjct: 70  SLNPFINKGVAAENIGIIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYLRPEARF 129

Query: 125 HDGHPIRAEDVVFTFQELIKEGSPIYRTYYADVDEVVAEDPLKVLFKFKRTNNRELPLIL 184
           HDGHP+RA+DVVFTF  LIK+G+P+YR YYADV EVVAE+PLKVLFKFK  NNRELPLIL
Sbjct: 130 HDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNRELPLIL 189

Query: 185 GQLPVLPKHWWATRDFAKGNLEVPLGSGPYKVAEVKAGRMIRYERVKDYWAKDLPITQGF 244
           GQLPVLPKHW+  R+F +GNLE+PLGSGPYKVA+VKAGR +RYERVKDYWAKDLPI +GF
Sbjct: 190 GQLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPINRGF 249

Query: 245 YNFDNRITDYYRDSTVSLEALKAGQFDYWLEFSAKNWANAYNIPAVAQGRLIKEEIPNGN 304
           YNFD    D YRD+TV+LEALKAG FDY LE SAKNWA AYN+PAV +GRLIKEE+PNGN
Sbjct: 250 YNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELPNGN 309

Query: 305 PTGMQGFVFNMRKPMFQDVRVRKAISLLLDFEWSNKQLFNGAYTRTRSYFENSEMAATGL 364
           PTGMQGF+FN+R+P+FQDVRVR+A+SLLLD+EW+NKQLFNGAYTRT SYFENSEMAA GL
Sbjct: 310 PTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEMAARGL 369

Query: 365 PGPDELAILEPLRGKIPPEVFTQAFEPSKTDGSGMIRTQQREAYQLLQEAGWRIVDDKMV 424
           P P+EL ILEPLRGK+P +VFT+ F    +DGSGMIR QQR+AY+LLQEAGW+IVDDKMV
Sbjct: 370 PSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDDKMV 429

Query: 425 DTSGKPVTIEFLLAQTEFERILLPFKRNLADLGIDLVIRRVDVSQFINRIRSRDFDMLVG 484
           D  GKP +IEFLLAQTEFERILLPFKRNLADLGI+L IRRVDVSQ+I R+RSRD+DM+VG
Sbjct: 430 DAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRDYDMIVG 489

Query: 485 SFPQSTSPGNEQREFWKSSSADKPGSRNYMGLKDPAIDQLVEELIDADSRKSLVAHAKAL 544
            +PQS SPGNEQREFW S++AD PGSRN++GL+DPAIDQLV++LI+ADSR+SL+ H +AL
Sbjct: 490 GYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLINADSRQSLIDHCRAL 549

Query: 545 DRVLQFGYYVIPNWHIKTFRVAYWDHLGHPKVPPRYDVGTATWWAKPDVKPAVTLETSAD 604
           DRVL +GYYVIPNWHIKT+RVAYW+H+GHP V P+YD+G  TWW KPDV PAV+ E  AD
Sbjct: 550 DRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWWIKPDVTPAVS-EAPAD 608

Query: 605 PAS 607
            A+
Sbjct: 609 EAN 611