Pairwise Alignments

Query, 610 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 642 a.a., putative ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  542 bits (1396), Expect = e-158
 Identities = 272/574 (47%), Positives = 371/574 (64%), Gaps = 4/574 (0%)

Query: 19  QAAPQHALTLYNEPPKYPADFKHFDYVNPDAPKGGTFRESAM--GGFDSLNPYISKGVPA 76
           QAAP HALT+Y E P+Y A F+HFDYVNP APKGG  R SA+  G FD + PYI KG+  
Sbjct: 49  QAAPTHALTVYGEAPRYAASFRHFDYVNPSAPKGGILRRSAIEIGQFDHILPYIDKGIGV 108

Query: 77  DNL-GLIYDTLAMQSLDEPITEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDV 135
             + GL+Y  LA++S DEP T YGL+A ++E+ P++ W+RF + P A F DG P+RAEDV
Sbjct: 109 SEVDGLLYAPLAVRSYDEPYTVYGLIARRMERGPNDEWLRFDIDPRATFADGRPVRAEDV 168

Query: 136 VFTFQELIKEGSPIYRTYYADVDEVVAEDPLKVLFKFKRTNNRELPLILGQLPVLPKHWW 195
            FTF  L+ +GS  YRT +ADV  V  E    V F  K  + R L L L  LPV+P+H  
Sbjct: 169 RFTFDLLMSKGSLKYRTQFADVARVTVERLHSVRFDLKPEHGRTLALDLASLPVMPEHDL 228

Query: 196 ATRDFAKG-NLEVPLGSGPYKVAEVKAGRMIRYERVKDYWAKDLPITQGFYNFDNRITDY 254
             RDFA G   + P+GSGPY++  +  GR I +ER   +WA+DLP ++G YNFD    +Y
Sbjct: 229 QQRDFANGAGFDKPVGSGPYRIGRIDNGRSITFERDPAWWARDLPASRGRYNFDKLRIEY 288

Query: 255 YRDSTVSLEALKAGQFDYWLEFSAKNWANAYNIPAVAQGRLIKEEIPNGNPTGMQGFVFN 314
           + D+ V+ + LK G +DY  EFSA  +   YN   +  GRL +  +    P   QGFVFN
Sbjct: 289 FGDTEVARQVLKGGGYDYNREFSATAYTLGYNGAQLDDGRLQRAHLGPAKPQVAQGFVFN 348

Query: 315 MRKPMFQDVRVRKAISLLLDFEWSNKQLFNGAYTRTRSYFENSEMAATGLPGPDELAILE 374
           + +P F+D RVR+A+ +L DFEWSN+Q+    Y R +S F N+ +AA  LP   EL +L 
Sbjct: 349 LDQPQFKDRRVRQALGMLWDFEWSNRQMMRNLYIRQQSVFSNTPLAARQLPDAGELKLLA 408

Query: 375 PLRGKIPPEVFTQAFEPSKTDGSGMIRTQQREAYQLLQEAGWRIVDDKMVDTSGKPVTIE 434
           PLRG++P EVFT  F    TDGSG+IR QQ +A  LL++AGW    D++V++ G P+   
Sbjct: 409 PLRGQVPDEVFTTVFTAPVTDGSGIIRQQQLQALALLEQAGWHPEGDRLVNSQGTPLAFT 468

Query: 435 FLLAQTEFERILLPFKRNLADLGIDLVIRRVDVSQFINRIRSRDFDMLVGSFPQSTSPGN 494
           FL  Q   ER+LLP+KRNLA +G+ L IR VD +Q++NR+ +RD+DM+V  +P + SPG 
Sbjct: 469 FLNGQAGLERLLLPWKRNLAQIGVTLNIRNVDSAQYVNRLMARDYDMIVTGYPVTLSPGA 528

Query: 495 EQREFWKSSSADKPGSRNYMGLKDPAIDQLVEELIDADSRKSLVAHAKALDRVLQFGYYV 554
           E   ++ S++A  PGS N M L+DPA+D L++ L+ AD++  ++ HA ALDRVLQ+ YY 
Sbjct: 529 ELYNYFGSAAAHDPGSNNLMVLQDPAVDHLIDGLVRADTQADMLRHAHALDRVLQWNYYW 588

Query: 555 IPNWHIKTFRVAYWDHLGHPKVPPRYDVGTATWW 588
           IPN++       +W+  G PKV   YD G  TWW
Sbjct: 589 IPNYYPPGSSTVWWNRFGLPKVQATYDEGLDTWW 622