Pairwise Alignments

Query, 610 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 542 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 79.3 bits (194), Expect = 4e-19
 Identities = 106/443 (23%), Positives = 170/443 (38%), Gaps = 65/443 (14%)

Query: 62  GFDSLNPYISKGVPADNLGL-----IYDTLAMQSLDEPITEYGLVAGKIEKAPDNSWVRF 116
           G  S  P I   + A ++       + D+L  Q+ D   T +  +A + E + +N+   F
Sbjct: 49  GLGSDTPVIDPSITAYSVAALVARNVVDSLVGQAEDNRFTPW--LAERWEISDNNTRYTF 106

Query: 117 YLRPEARFHDGHPIRAEDVVFTFQELI--KEGSPIYRTYYADVDEVVAEDPLKVLFKFKR 174
           +LR +  F DG  + A  V +    ++  K  S   ++    +D +   D   V+  +K 
Sbjct: 107 HLRKDVTFSDGTKLDAAAVKYNLDRILDPKTTSSYAKSLLGPIDSISTPDDDTVVISYKS 166

Query: 175 T-----NNRELPLILGQLPVLPKHWWATRDFAKGNLEVPLGSGPYKVAEVKAGRMIRYER 229
                     LP +  Q P   K+   T +         +GSGP+ +     G   R ++
Sbjct: 167 PFAALLQGLSLPYLGIQSPTYLKNTPNTSNTI-------VGSGPFILESFVKGSGSRLKK 219

Query: 230 VKDY-WAKDLPITQGFYNFDNRITDYYRDSTVSLEALKAGQFDYWLEFSAKNWANAYNIP 288
             DY W        G    D     Y  +S+V L AL +GQ        A   ANA  + 
Sbjct: 220 RPDYHWGPGYAAHTGPAYLDKIEFKYLPESSVRLGALSSGQVQ---AIDAVPPANAAALK 276

Query: 289 AVAQGRLIKEEIPNGNPTGMQGFVFNMRKPMFQDVRVRKAISLLLDFEWSNKQLFNGAYT 348
             A+  LI  E P  N         N  K  FQDV VR+A    +D           A +
Sbjct: 277 KDARLELITRENPGVNRV----LYLNTSKGPFQDVNVRRAFLHAVD-----------AAS 321

Query: 349 RTRSYFENSEMAATGLPGPDELAILEPLRGKIPPEVFTQAFEPSKTDGSGMIRTQQREAY 408
            T+  F  +  AA  + GP  L   +P                     + +     ++A 
Sbjct: 322 ATKVAFFGTLKAADNILGPSTLYYDKP--------------------AASLGGFDLKKAI 361

Query: 409 QLLQEAGWRIVDDKMVDT-SGKPVTIEFLLAQTEFE----RILLPFKRNLADLGIDLVIR 463
           QLL +AGW+  D +   T  GK +T+ F+ + +  E     +    +  +   GID+ + 
Sbjct: 362 QLLDDAGWKTKDGEGYRTKDGKRLTVNFVYSTSSSEAAEITLFQAVQYQVKQAGIDVQLN 421

Query: 464 RVDVSQFINRIRSRDFDMLVGSF 486
            VD   FI+R    D+D+    F
Sbjct: 422 PVDGGGFISRTNDNDYDIASNYF 444