Pairwise Alignments

Query, 339 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  133 bits (334), Expect = 6e-36
 Identities = 81/251 (32%), Positives = 136/251 (54%), Gaps = 12/251 (4%)

Query: 94  LWAPIPFSY----QSINYDLKVPAPAPPSSVNWLGTDDQGRDVLARVIYGFRVSVLFALT 149
           L+AP+   Y    Q+I Y L+     PPS+  WLGTD  GRDVL+R+IYG RVS+L    
Sbjct: 40  LFAPLIAPYDPLQQNIAYRLE-----PPSAEFWLGTDTYGRDVLSRLIYGTRVSLLVGFV 94

Query: 150 LTVLSSIIGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGI 209
             +++ ++G   G + G+ GG  D     F+++    P L L +++A+ +  +   L+  
Sbjct: 95  AVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGASLENLIIA 154

Query: 210 MLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGMQNGAIMFRHILPNAMVSTMTFMPFIL 269
           + +      V + RA  +  +  ++V A R+LG   G +M  HILPN +   +      +
Sbjct: 155 IAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEVLVLGALWM 214

Query: 270 TGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSNLQAPWLGMSAFAVLAIMLSLLV--FI 327
             AI T  +L F+G G+P  +P+ G ++ +G  N+   W  ++ F  LAI+L++L    +
Sbjct: 215 ATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAW-WLTVFPSLAILLTVLALSLL 273

Query: 328 GESARDAFDPR 338
           G++ RDA DP+
Sbjct: 274 GDALRDANDPK 284