Pairwise Alignments

Query, 619 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

 Score =  425 bits (1092), Expect = e-123
 Identities = 235/602 (39%), Positives = 343/602 (56%), Gaps = 19/602 (3%)

Query: 8   IFSSTLALLLASSVVIAAPQPYLTVYGEPAKYAAGFTHFDYANPNAPKGGSLRRSAIEIG 67
           + S +LAL   ++ +++    Y   +G   KY A FTHFD+ NP APKGG+LR  A+  G
Sbjct: 6   LLSLSLALSFPAAAIVSESHGYAQ-FGT-LKYPATFTHFDWVNPQAPKGGTLR--AMAFG 61

Query: 68  RFDHVLPYIDKG-----------IGVSQVDGWLYAPLAQR--SLDEPYTVYGLVAEKMER 114
            FD + PY  KG            G+S+++  L     Q   S DEP + YGL+A  +E 
Sbjct: 62  TFDTLNPYTFKGSSPITTPNFQQYGISELNEPLMVGTGQYDPSGDEPTSSYGLIARSVEY 121

Query: 115 ADDGLSLRFFLNPKARFADGKPITAEDVRYSFDLLMTQGSLRFRTLFADVKHVEVEGERQ 174
           ++D   + F L P+AR+ DG+PIT+ DV +S+  L+  G   +RT   +V+ V++ G  +
Sbjct: 122 SEDRSWVVFNLRPEARWHDGQPITSADVAFSYRTLLKDGHPIYRTNLQEVQRVDILGPLR 181

Query: 175 VRFDFSSNENRTLPLDIATLPVFPEHWWKTRDFANGGGYEAPLGSGPYKVSKIDSGSTIT 234
           +RF F    N  L L +  +PV P+H+W+ RDF     +E PLGSGPY+++++  G  + 
Sbjct: 182 IRFVFKRAGNPLLILRLGEMPVLPKHYWQKRDF-KATTFEPPLGSGPYRITQVQPGRRLV 240

Query: 235 FTRDPNWWGKDLPVSRGLYNFDHLSLEYFGDTEVARQVLRGGAYDFNREFSATGYSIGYN 294
           F R  N+WGKDL V+RG YNF+ +  E++ D  VA +  + G +D   E  A  ++ GYN
Sbjct: 241 FERVKNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFKAGEFDIYIEHQAKNWANGYN 300

Query: 295 GPALDDGRLQRAHLAKEMPQPAQGYVFNVQKPVFKDRRVRQALAMLWDFEWANRQMMRNM 354
            PA+  G + +A +   +P   QG   N ++  F D RVRQAL ++ DFEW NR +  + 
Sbjct: 301 FPAVRRGEVIKAQIPHSIPTQTQGLFMNSRRAAFSDPRVRQALGLMLDFEWTNRALFSSA 360

Query: 355 YIRQQSFFSNSPLAATQPPTQEELAILEPLRGQVPDEVFTQVFKAPVTDGSGMIRDKQLQ 414
           Y R  S++ NS  AA+  PT +E  +L P R Q+P ++F++ +K   TDG G+ R    Q
Sbjct: 361 YRRSTSYYPNSEFAASGLPTGKEWLLLAPFRDQLPAKLFSEPYKVSHTDGRGISRQTLRQ 420

Query: 415 ALALLEEAGWKPHGDKLVNAEGEPLEFTFLNAQSGLERLLLPYKRNLAQIGITLNIRRID 474
           AL LL EAGWK HG +LV+++G+ L    L     LER+L PY  NL+ IGI   +R +D
Sbjct: 421 ALGLLAEAGWKLHGQRLVDSKGQQLRMELLLVNPNLERILQPYVENLSSIGIDARLRTVD 480

Query: 475 ASQYVNRVMARDYDMIVTGFPVTTSPGMELYNYFGSAAAFDPGANNYMVLKDPAVDSLIK 534
            +QY  R+   D+DMI+     T SPG+E + YF S+ A   G+ NY  +KDP VD L+ 
Sbjct: 481 RAQYKQRLDQFDFDMILMTLNQTLSPGLEQWLYFHSSQAATKGSKNYAGVKDPVVDHLLD 540

Query: 535 GLVKADTQAQMLTYAHALDRVLQWNYLWIPNYYPPGTSAAWWNRFGRPAIEAKNDEALET 594
            L+ A T+   +  A ALDRVL W+Y  IPN+Y      A+ NRF            L +
Sbjct: 541 TLLAARTRDDQVAAARALDRVLSWHYYMIPNWYLDNHRLAYRNRFAF-VTTPPYTLGLNS 599

Query: 595 WW 596
           WW
Sbjct: 600 WW 601