Pairwise Alignments

Query, 619 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 642 a.a., putative ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  892 bits (2304), Expect = 0.0
 Identities = 425/593 (71%), Positives = 493/593 (83%), Gaps = 1/593 (0%)

Query: 22  VIAAPQPYLTVYGEPAKYAAGFTHFDYANPNAPKGGSLRRSAIEIGRFDHVLPYIDKGIG 81
           V AAP   LTVYGE  +YAA F HFDY NP+APKGG LRRSAIEIG+FDH+LPYIDKGIG
Sbjct: 48  VQAAPTHALTVYGEAPRYAASFRHFDYVNPSAPKGGILRRSAIEIGQFDHILPYIDKGIG 107

Query: 82  VSQVDGWLYAPLAQRSLDEPYTVYGLVAEKMERADDGLSLRFFLNPKARFADGKPITAED 141
           VS+VDG LYAPLA RS DEPYTVYGL+A +MER  +   LRF ++P+A FADG+P+ AED
Sbjct: 108 VSEVDGLLYAPLAVRSYDEPYTVYGLIARRMERGPNDEWLRFDIDPRATFADGRPVRAED 167

Query: 142 VRYSFDLLMTQGSLRFRTLFADVKHVEVEGERQVRFDFSSNENRTLPLDIATLPVFPEHW 201
           VR++FDLLM++GSL++RT FADV  V VE    VRFD      RTL LD+A+LPV PEH 
Sbjct: 168 VRFTFDLLMSKGSLKYRTQFADVARVTVERLHSVRFDLKPEHGRTLALDLASLPVMPEHD 227

Query: 202 WKTRDFANGGGYEAPLGSGPYKVSKIDSGSTITFTRDPNWWGKDLPVSRGLYNFDHLSLE 261
            + RDFANG G++ P+GSGPY++ +ID+G +ITF RDP WW +DLP SRG YNFD L +E
Sbjct: 228 LQQRDFANGAGFDKPVGSGPYRIGRIDNGRSITFERDPAWWARDLPASRGRYNFDKLRIE 287

Query: 262 YFGDTEVARQVLRGGAYDFNREFSATGYSIGYNGPALDDGRLQRAHLAKEMPQPAQGYVF 321
           YFGDTEVARQVL+GG YD+NREFSAT Y++GYNG  LDDGRLQRAHL    PQ AQG+VF
Sbjct: 288 YFGDTEVARQVLKGGGYDYNREFSATAYTLGYNGAQLDDGRLQRAHLGPAKPQVAQGFVF 347

Query: 322 NVQKPVFKDRRVRQALAMLWDFEWANRQMMRNMYIRQQSFFSNSPLAATQPPTQEELAIL 381
           N+ +P FKDRRVRQAL MLWDFEW+NRQMMRN+YIRQQS FSN+PLAA Q P   EL +L
Sbjct: 348 NLDQPQFKDRRVRQALGMLWDFEWSNRQMMRNLYIRQQSVFSNTPLAARQLPDAGELKLL 407

Query: 382 EPLRGQVPDEVFTQVFKAPVTDGSGMIRDKQLQALALLEEAGWKPHGDKLVNAEGEPLEF 441
            PLRGQVPDEVFT VF APVTDGSG+IR +QLQALALLE+AGW P GD+LVN++G PL F
Sbjct: 408 APLRGQVPDEVFTTVFTAPVTDGSGIIRQQQLQALALLEQAGWHPEGDRLVNSQGTPLAF 467

Query: 442 TFLNAQSGLERLLLPYKRNLAQIGITLNIRRIDASQYVNRVMARDYDMIVTGFPVTTSPG 501
           TFLN Q+GLERLLLP+KRNLAQIG+TLNIR +D++QYVNR+MARDYDMIVTG+PVT SPG
Sbjct: 468 TFLNGQAGLERLLLPWKRNLAQIGVTLNIRNVDSAQYVNRLMARDYDMIVTGYPVTLSPG 527

Query: 502 MELYNYFGSAAAFDPGANNYMVLKDPAVDSLIKGLVKADTQAQMLTYAHALDRVLQWNYL 561
            ELYNYFGSAAA DPG+NN MVL+DPAVD LI GLV+ADTQA ML +AHALDRVLQWNY 
Sbjct: 528 AELYNYFGSAAAHDPGSNNLMVLQDPAVDHLIDGLVRADTQADMLRHAHALDRVLQWNYY 587

Query: 562 WIPNYYPPGTSAAWWNRFGRPAIEAKNDEALETWWEISPTPLTNEQMNAELKK 614
           WIPNYYPPG+S  WWNRFG P ++A  DE L+TWWE++PTPLTN QM AE +K
Sbjct: 588 WIPNYYPPGSSTVWWNRFGLPKVQATYDEGLDTWWEVNPTPLTNAQM-AERRK 639