Pairwise Alignments

Query, 340 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

 Score =  502 bits (1292), Expect = e-147
 Identities = 236/336 (70%), Positives = 286/336 (85%)

Query: 4   LSPVARRRFERFKKNRRGWWSLWLFIGLFILTLGGELIANDKPLVLSFKNELYFPVFKRY 63
           LSP+ RRRFERFK NRRGWWSLWLF+ LF L+LG ELIANDKP+ + +  + YFP FKRY
Sbjct: 3   LSPLNRRRFERFKANRRGWWSLWLFLILFGLSLGAELIANDKPIAVRYDGQWYFPAFKRY 62

Query: 64  TEQAFGGQLPFQADYRSDYVKKLIEQDGGWMLFPPIPFSDDTPNYELTRPAPSPPSAVNW 123
            E  FGG+ P +A+Y+S Y+++L+ +   ++L+ PIPFS  + NY+L  PAP+PPSA NW
Sbjct: 63  PETTFGGEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAPAPPSADNW 122

Query: 124 LGTDDQSRDVLARVIFGARVSILFALALTAISAAIGIAAGALQGYYGGWVDLIGQRVLEV 183
           LGTDDQ RDVLARVI+G R+S+LFAL LT  S+ +G+ AGALQG+YGGWVDL GQR LE+
Sbjct: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLEI 182

Query: 184 WSGLPVLYLLIILSGFVEPNFWWLLGIMALFSWLALVDVVRAEFLHGRNLEYVKAARALG 243
           WSGLPVLYLLIIL+ FV+PNFWWLLGIM LFSW++LVDVVRAEFL GRNLEYV+AARALG
Sbjct: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242

Query: 244 LGDGKIIRRHILPNAMTATLSYLPFILTGAISTLSALDFLGFGMPAGSASLGELIAQGKQ 303
           + +G I+ RHILPNAM +T++++PFILTGAI TL+ALDFLGFG+PAGS SLGEL+AQGK 
Sbjct: 243 MRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKS 302

Query: 304 NLQAPWLGLTAFFTLALILSLLVFIGEALRDAFDPR 339
           NLQAPWLG++AF  LAL+LSLLVFIGE+ RDAFDPR
Sbjct: 303 NLQAPWLGISAFAVLALMLSLLVFIGESARDAFDPR 338