Pairwise Alignments

Query, 340 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 341 a.a., Inner membrane ABC transporter permease protein YejE from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  426 bits (1096), Expect = e-124
 Identities = 202/338 (59%), Positives = 262/338 (77%), Gaps = 1/338 (0%)

Query: 1   MLNLSPVARRRFERFKKNRRGWWSLWLFIGLFILTLGGELIANDKPLVLSFKNELYFPVF 60
           M  LSPV + R+ RF+ NRRG+WSLW+F+ LF L+L  ELIANDKPL++ +    YFP+ 
Sbjct: 1   MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLL 60

Query: 61  KRYTEQAFGGQLPFQADYRSDYVKKLIEQDGGWMLFPPIPFSDDTPNYELTRPAPSPPSA 120
           K Y+E  FGG L  QADY+  ++K+ +E +G W+L+ PI F   + N+   +P PSPPS 
Sbjct: 61  KNYSESDFGGPLASQADYQDPWLKQRLENNG-WVLWAPIRFGATSINFATDKPFPSPPSR 119

Query: 121 VNWLGTDDQSRDVLARVIFGARVSILFALALTAISAAIGIAAGALQGYYGGWVDLIGQRV 180
            NWLGTD    DVLAR+++G R+S+LF L LT  S+ +G+ AGALQGYYGG VDL GQR 
Sbjct: 120 QNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRF 179

Query: 181 LEVWSGLPVLYLLIILSGFVEPNFWWLLGIMALFSWLALVDVVRAEFLHGRNLEYVKAAR 240
           +EVWSG+P L+L+I+LS  V+PNFWWLL I  LF W++LV VVRAEFL  RN +Y++AA+
Sbjct: 180 IEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQ 239

Query: 241 ALGLGDGKIIRRHILPNAMTATLSYLPFILTGAISTLSALDFLGFGMPAGSASLGELIAQ 300
           ALG+ D  II RH+LPNAM ATL++LPFIL  +I+TL++LDFLGFG+P GS SLGEL+ Q
Sbjct: 240 ALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQ 299

Query: 301 GKQNLQAPWLGLTAFFTLALILSLLVFIGEALRDAFDP 338
           GK NLQAPWLG+TAF ++A++LSLL+FIGEA+RDAFDP
Sbjct: 300 GKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDP 337