Pairwise Alignments

Query, 340 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 341 a.a., ABC transporter permease subunit from Dickeya dadantii 3937

 Score =  424 bits (1090), Expect = e-123
 Identities = 204/338 (60%), Positives = 261/338 (77%), Gaps = 1/338 (0%)

Query: 1   MLNLSPVARRRFERFKKNRRGWWSLWLFIGLFILTLGGELIANDKPLVLSFKNELYFPVF 60
           M  LSP+ + R+ RF+ NRRG+WSLW+F+ LF++TL  EL+ANDKPL++ +  + Y PV 
Sbjct: 1   MSRLSPINQARWARFRANRRGYWSLWVFLALFVVTLCSELVANDKPLLVRYDGQWYAPVM 60

Query: 61  KRYTEQAFGGQLPFQADYRSDYVKKLIEQDGGWMLFPPIPFSDDTPNYELTRPAPSPPSA 120
             Y+E  FGGQL   ADYR  ++ + +EQ GGW L+P I +  DT NY      PSPPS 
Sbjct: 61  VDYSETTFGGQLATPADYRDPWLVQRLEQ-GGWALWPLIHYRYDTINYATQSAFPSPPSR 119

Query: 121 VNWLGTDDQSRDVLARVIFGARVSILFALALTAISAAIGIAAGALQGYYGGWVDLIGQRV 180
            N LGTD Q RDVLA+V++G R+SILF LALT +S+ IGI  GA QGYYGG VDL GQR+
Sbjct: 120 QNLLGTDSQGRDVLAQVLYGFRISILFGLALTLLSSLIGIVVGASQGYYGGRVDLWGQRL 179

Query: 181 LEVWSGLPVLYLLIILSGFVEPNFWWLLGIMALFSWLALVDVVRAEFLHGRNLEYVKAAR 240
           +EVWSG+P L+L+I+LS  ++PNFWWLLGI  LF W+ALV VVRAEFL  RN +Y++AA+
Sbjct: 180 IEVWSGMPTLFLIILLSSVIQPNFWWLLGITVLFGWMALVGVVRAEFLRTRNFDYIRAAQ 239

Query: 241 ALGLGDGKIIRRHILPNAMTATLSYLPFILTGAISTLSALDFLGFGMPAGSASLGELIAQ 300
           A+G+ D  I+ R +LPNAM ATL+YLPFIL G+I+TL++LDFLGFG+P GSASLG L+ +
Sbjct: 240 AMGVSDRSIMFRCMLPNAMVATLTYLPFILCGSITTLTSLDFLGFGLPMGSASLGGLLLE 299

Query: 301 GKQNLQAPWLGLTAFFTLALILSLLVFIGEALRDAFDP 338
           GK NLQAPWLG+T F  LA++LSLL+FIGEA+RDAFDP
Sbjct: 300 GKNNLQAPWLGITVFMVLAVVLSLLIFIGEAVRDAFDP 337