Pairwise Alignments

Query, 340 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 399 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  134 bits (337), Expect = 4e-36
 Identities = 85/232 (36%), Positives = 124/232 (53%), Gaps = 12/232 (5%)

Query: 117 PPSAVNWLGTDDQSRDVLARVIFGARVSILFALALTAISAAIGIAAGALQGYYGGWVDLI 176
           P ++++ LGTD   RD+L+R+  GA++S+   L   A+S AIGI  G + GY+GGW+D  
Sbjct: 166 PGASLHLLGTDRLGRDMLSRLAIGAQLSLTVGLLGIAVSFAIGITLGGMAGYFGGWIDAG 225

Query: 177 GQRVLEVWSGLPVLYLLIILSGFVEPN------FWWLLGIMALFSWLALVDVVRAEFLHG 230
            QR+ E+   LP L L + LS  V         F  +  I+ L  W +L   VR+ FL  
Sbjct: 226 VQRLSEILKSLPELPLWLALSAAVPAQWSPVTVFLCISVILGLLDWPSLARAVRSRFLAL 285

Query: 231 RNLEYVKAARALGLGDGKIIRRHILPNAMTATLSYLPFILTGAISTLSALDFLGFGMPAG 290
           R  ++V AA  +G    +IIRRH+LPN  +  L+     +   I   +AL FLG G+   
Sbjct: 286 REEDFVMAAELMGASPARIIRRHLLPNFASHLLASATLSIPAMILGETALSFLGLGLRPP 345

Query: 291 SASLGELIAQGKQNLQA----PWLGLTAFFTLALILSLLVFIGEALRDAFDP 338
           + S G ++    QNL A    PW+ L     + ++LS   F G+ LRDA DP
Sbjct: 346 ATSWGVML-NDAQNLMAVETYPWVSLPMLPVILVVLS-FNFFGDGLRDALDP 395