Pairwise Alignments

Query, 340 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 315 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  127 bits (318), Expect = 5e-34
 Identities = 77/228 (33%), Positives = 125/228 (54%), Gaps = 12/228 (5%)

Query: 124 LGTDDQSRDVLARVIFGARVSILFALALTAISAAIGIAAGALQGYYGGWVDLIGQRVLEV 183
           LGTD Q RD+L+ +++G R+SI+  +A   +S  IG+ AG + GY+GG+ D +  R+ ++
Sbjct: 86  LGTDTQGRDMLSAILYGTRISIVIGVASVVLSLVIGMTAGLVAGYFGGFADGLLMRIGDI 145

Query: 184 WSGLPVLYLLIILSGFVE---PNFWWLLG-------IMALFSWLALVDVVRAEFLHGRNL 233
              +P + + I++S  V    P+    +G        +AL +W+     VRA+ +     
Sbjct: 146 TLSIPTILVAILVSTVVRQMLPDSLREVGASAVLILAIALSAWVQYARTVRAQAIVETGK 205

Query: 234 EYVKAARALGLGDGKIIRRHILPNAMTATLSYLPFILTGAISTLSALDFLGFGMPAGSAS 293
           +YV+AA+ +G+   +I+  HILPN +T  +         AI T + L FLG GMP    S
Sbjct: 206 DYVQAAKLIGVPARRIMAAHILPNTLTPIMVAATLNFGMAILTEATLSFLGIGMPPSQPS 265

Query: 294 LGELIAQGKQNLQAP--WLGLTAFFTLALILSLLVFIGEALRDAFDPR 339
           LG LI  G Q L +   W+ L   F L L++  +  +G+ LRDA +P+
Sbjct: 266 LGTLIRIGNQFLFSGSWWIVLFPVFQLCLLVVTVNLLGDWLRDALNPK 313