Pairwise Alignments

Query, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  429 bits (1104), Expect = e-124
 Identities = 241/518 (46%), Positives = 334/518 (64%), Gaps = 4/518 (0%)

Query: 4   IEIRDLSVAFSGQTVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTETTGS 63
           +E   L+V   G+ +VRN+S D+ PGE + +VGESGSGK+  A +I+ L P     T G 
Sbjct: 14  VEGLTLAVGMGGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRTAGR 73

Query: 64  IQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHK-GLGGKA 122
           I + G++L  A  A L++LRG R+ M+FQEPMTSLNP  +I KQ+ E L LH+  L   A
Sbjct: 74  ILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRRDLSPAA 133

Query: 123 AQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDV 182
            + RIL++L  VGI+ P+  L A+PH+ SGG RQR+M+A  +  EP LLIADEPTTALD 
Sbjct: 134 RRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEPTTALDA 193

Query: 183 TVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNAPQ 242
            VQR +L L+  L +    ++L+ISHDL +V    QR+ VMR GE++E      +   P+
Sbjct: 194 VVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDDMLEQPR 253

Query: 243 HPYSRLLLDAEPDA-DALCSDERETVLQVDDLTVQFRLGGGLFRRKTYLRAVDGISLSVQ 301
           H Y+R LL A P    A    +   V++V +L V +     LF +    RA+ GI L V+
Sbjct: 254 HAYTRELLQAMPHRLPARQVPDEAPVVEVRNLVVDYAGHRRLFAKTVPKRALHGIDLVVR 313

Query: 302 RGKTLGIVGESGSGKSTLGQAILRLLD-STGSIRFQGEALDPLNNQQMRPWRKQMQVVFQ 360
             + + +VG SGSGK+TLG+ I  LL  S G I F+G  +   ++     +R Q Q+VFQ
Sbjct: 314 PREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPI-LRSDAGWSDYRLQCQMVFQ 372

Query: 361 DPYGSLSPRMTVEQIISEGLEVHAPCSLADRDAQVIQVLKDVGLDPASRHRYPHEFSGGQ 420
           DPY SL PRMT+ Q++ EGL +    S ADR  +V +VL++VGL      RY HE SGGQ
Sbjct: 373 DPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGTGFAPRYAHELSGGQ 432

Query: 421 RQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFISHDLAVVR 480
           RQR+AIARA+V +PA ++ DEP SALD TV+ QV+AL  ELQ ++G + LFISHDL VV 
Sbjct: 433 RQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLGVVE 492

Query: 481 AMAHDMIVIKDGQVVERGASHAVFDAPQHPYTKELLAA 518
            +A  ++V++DG++VE+G+   VFDAP   YT++LL+A
Sbjct: 493 QVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSA 530



 Score =  172 bits (436), Expect = 3e-47
 Identities = 107/262 (40%), Positives = 151/262 (57%), Gaps = 18/262 (6%)

Query: 3   LIEIRDLSVAFSG----------QTVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQL 52
           ++E+R+L V ++G          +  +  + L VRP E +A+VG SGSGK+    +I  L
Sbjct: 279 VVEVRNLVVDYAGHRRLFAKTVPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGL 338

Query: 53  LPEAGTETTGSIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETL 112
           L  +G    G I +RG+ ++ + A         +  M+FQ+P  SL+P  +I + +GE L
Sbjct: 339 LQPSG----GEIMFRGRPILRSDAGWSDYRL--QCQMVFQDPYASLDPRMTIGQLVGEGL 392

Query: 113 LLHKGLGGKAAQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLI 172
            L KG+       R+ E+L+ VG+         Y H+LSGGQRQRV IA A+   P  +I
Sbjct: 393 RLVKGMSTADRARRVQEVLEEVGLGTGFA--PRYAHELSGGQRQRVAIARAIVRRPAFVI 450

Query: 173 ADEPTTALDVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQA 232
           ADEP +ALDVTV+ ++L L   LQKR G S L ISHDL +V  +A RV VM+ G IVEQ 
Sbjct: 451 ADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQG 510

Query: 233 DCQTLFNAPQHPYSRLLLDAEP 254
              T+F+AP   Y+R LL A P
Sbjct: 511 SRDTVFDAPTQDYTRKLLSAIP 532