Pairwise Alignments

Query, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  426 bits (1094), Expect = e-123
 Identities = 227/516 (43%), Positives = 340/516 (65%), Gaps = 7/516 (1%)

Query: 8   DLSVAFSGQTVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTETTGSIQYR 67
           DL         V+++S D+  GE L ++GESGSGKSVTA +I+ LL    T ++G IQ++
Sbjct: 20  DLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLSPVITVSSGEIQFK 79

Query: 68  GQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKGLGGKAAQ-AR 126
           G +++ A    ++ LRG  +++IFQ+P+++LNPL ++  Q+ E L  H G+G +  + A+
Sbjct: 80  GMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAH-GVGTRETRNAK 138

Query: 127 ILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQR 186
           +LELL+ VG+  P      YP +LSGGQRQRVMIAMALA +P++LIADEPTTALDVT Q 
Sbjct: 139 VLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADEPTTALDVTTQA 198

Query: 187 KILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNAPQHPYS 246
           +IL L++ +QKR  MS++ I+HD  +V  IA RV VM  G +VEQ     +   P HPY+
Sbjct: 199 QILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRADQVLINPVHPYT 258

Query: 247 RLLLDAEP---DADALCSDERETVLQVDDLTVQFRLGGGLFRRKTYLRAVDGISLSVQRG 303
           + L+ A P     +    +E   VL+V++L  ++R  G  FR+   ++AV+ +S  +++G
Sbjct: 259 QRLVAAVPRMRSVERSIDEEVPVVLEVENLEKEYRSSGSFFRKARTVKAVNNVSFKLRKG 318

Query: 304 KTLGIVGESGSGKSTLGQAILRLLD-STGSIRFQGEALDPLNNQQMRPWRKQMQVVFQDP 362
           +TLG+VGESGSGKS+LG+ +L+LLD   G+IRF G  +  ++    R  R  +Q++FQDP
Sbjct: 319 QTLGVVGESGSGKSSLGRVLLKLLDPDGGAIRFDGRDIATMDESAFRALRPYIQMIFQDP 378

Query: 363 YGSLSPRMTVEQIISEGLEVHAPCSLADRDAQVIQVLKDVGLDPASRHRYPHEFSGGQRQ 422
           + SL+PR T+ +I++ G   H   +L +   + + +LK VGLD  +  R+PHEFSGGQRQ
Sbjct: 379 FASLNPRHTIGKILTVGPLAHG-MALHEARTKALGILKLVGLDEQAYDRFPHEFSGGQRQ 437

Query: 423 RIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFISHDLAVVRAM 482
           RI IARAL+  P +++ DE  SALD ++Q QV+ LL  +Q +  +  +FI+HDL V   +
Sbjct: 438 RIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQI 497

Query: 483 AHDMIVIKDGQVVERGASHAVFDAPQHPYTKELLAA 518
             D++V+  G VVE+G    +F AP HPYT++L+AA
Sbjct: 498 CDDVLVMHKGTVVEQGPPTKIFRAPTHPYTQKLVAA 533



 Score =  166 bits (420), Expect = 2e-45
 Identities = 96/239 (40%), Positives = 145/239 (60%), Gaps = 8/239 (3%)

Query: 19  VRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTETTGSIQYRGQELIGASAAT 78
           V N+S  +R G+ L +VGESGSGKS     +L+LL   G    G+I++ G+++     + 
Sbjct: 308 VNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLDPDG----GAIRFDGRDIATMDESA 363

Query: 79  LQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKGLGGKAAQARILELLDLVGIQK 138
            + LR   I MIFQ+P  SLNP H+I K +    L H G+    A+ + L +L LVG+  
Sbjct: 364 FRALRPY-IQMIFQDPFASLNPRHTIGKILTVGPLAH-GMALHEARTKALGILKLVGLD- 420

Query: 139 PQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRKILLLLKSLQKR 198
            ++    +PH+ SGGQRQR+ IA AL  +P +L+ADE  +ALDV++Q ++L LL  +Q+ 
Sbjct: 421 -EQAYDRFPHEFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQRE 479

Query: 199 LGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNAPQHPYSRLLLDAEPDAD 257
           + ++++ I+HDL +   I   V VM  G +VEQ     +F AP HPY++ L+ A P AD
Sbjct: 480 MKVAMIFITHDLRVASQICDDVLVMHKGTVVEQGPPTKIFRAPTHPYTQKLVAAIPGAD 538