Pairwise Alignments

Query, 469 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 430 a.a., putative sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  240 bits (613), Expect = 6e-68
 Identities = 166/464 (35%), Positives = 248/464 (53%), Gaps = 58/464 (12%)

Query: 18  IQSLFEIIEQSSEGTVIVDRDANIVWMNERYAKRFGLKSADEAIGQ-----------PCE 66
           I +L   +E  +  T+++D D NI+  N  Y ++FG +     +G+           PC+
Sbjct: 8   ILALVSYLEHDALPTIVLDTDYNILAANAAYRRQFG-RHDQAPLGEKCHRVSHHYAVPCD 66

Query: 67  QVISNSLLRQVVRNDQPI-LLDIQDTPKGP--LVVMRLPIHNEAGAVIGAIGFALFDELR 123
           Q   +  +R+   +  P  +L I  TP+GP  + V   PI +E G V+            
Sbjct: 67  QAGEHCPMRKAWDSKVPERVLHIHHTPRGPEHVDVELRPILDEQGKVVA----------- 115

Query: 124 NLSPLIERYLSMQQELASTRSLLRSRQSKYNFAHFIGTSAASLEVKRRARRSASAESPVL 183
                +ER  ++   LAS +      Q     A     + ASL+      R+A A+ PVL
Sbjct: 116 ----FVERLTTIT--LASAQP---QEQGLVGRAPTFKAALASLQ------RAAPAQIPVL 160

Query: 184 LLGETGTGKELLAQAIHGASSRAHKAFVSINSAAIPADLLEAEFFGTAPGAFTGADRKGR 243
           L GE+GTGKEL A+A+H  S RA+   V ++   +   L E+E FG   GAFTGA+++ +
Sbjct: 161 LQGESGTGKELFARAVHMGSPRANGPLVVVDCTGLTESLFESELFGYEKGAFTGANQR-K 219

Query: 244 PGKFQIAQGGTLFLDEIGDMPLPLQSKLLRVLQEKEFEPVGSNEMLHSDVRVIAATSMDL 303
            G  + A GGTLFLDEIG++PL +Q KLLR+++   F PVGS   +HSD R+I+AT   L
Sbjct: 220 IGLAEAAHGGTLFLDEIGEVPLAMQVKLLRLIESGSFRPVGSLRTVHSDFRLISATHKPL 279

Query: 304 EAAIKRGEFRADLYYRLNVLPIQVPPLRERLEDIPALSEAILEELRSQ--HELDREALAL 361
           +  +  G FR DLYYR++  PI++P LRER++D+P L++++L+ +  Q    L  +AL  
Sbjct: 280 KQMVADGSFREDLYYRISGFPIRLPALRERVKDLPLLAQSLLQRMAGQPTPRLSEDALQQ 339

Query: 362 LAQHAWPGNIRELRNVLERAALLSDDLVLDAREIRAAIGTFTPVERASAVAAVEGESFSA 421
           LA H +PGNIRELRN+LERA L +DD V+    +          E      A +G     
Sbjct: 340 LALHPFPGNIRELRNILERARLFADDGVIRPEHL---------PEDTGLTGAAKGSG--- 387

Query: 422 ARERFDRQVIGAALRACEGNVIEAANRLGLGRSTLYKKMVALDL 465
              R D   +  AL   +G+  E A+ LG+   TLY+++ AL L
Sbjct: 388 --RRNDLGELAQALEQFKGSRSELASHLGMSERTLYRRLKALGL 429