Pairwise Alignments

Query, 831 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 795 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  333 bits (854), Expect = 2e-95
 Identities = 240/704 (34%), Positives = 370/704 (52%), Gaps = 58/704 (8%)

Query: 147 ETNERRKAQH---NTEQRLQLALAATDAVGTWDWDIGEDRFIADAHFAYLHGVDPSDARL 203
           E   RR+A+    + E R ++A+ A   +GTWD    E   + D     L GV  S    
Sbjct: 127 ERQRRRRAEEALADVEARARIAIDAA-GMGTWDLRPQEGLLLWDDRCKTLFGVPTSTEMS 185

Query: 204 LPISDYLHGVHPEDRGMVAGSIKHCITFGTE--YAEEYRLLLADG-QVRWVFARGRC-YK 259
           L +  +  G++P+D  +V  +++H +   ++  Y  E+R+   +G + RW+ + G+  + 
Sbjct: 186 LEV--FYAGIYPDDLPLVREAVEHAMRPESDGHYRVEFRIAQPNGLEPRWLLSSGQSQFV 243

Query: 260 DHQGRPARFLGAALDLTERKHTEQALRQSQTELQLIINAMPV-----------LIGYVDH 308
           D Q    RF G   D+  ++   QALRQ    L   +                L+  ++ 
Sbjct: 244 DDQC--VRFSGVLQDIHAQRQATQALRQLNEMLGERVERRTRERDRAWELSQDLLAVLNK 301

Query: 309 EQRFRLNNSAYLEWYGMTPQELYGKTIREVLGDEVYAGREDKIAAALKGKACS-FMTITP 367
           +      N A+    G + + L   ++  +L +        ++AA   G+  + F+    
Sbjct: 302 DLTPVALNPAWEASLGFSRERLSQSSLLHLLPEHDQEQLLTELAALAHGRTSARFVGRIL 361

Query: 368 HRDGRPRHALMKYLPRFSNDGSVNGFYIFVIDETERKLTEEALRHLNENLEERVAQRTQA 427
           H  G+ R      +P  +        Y+   D T  +  E AL                +
Sbjct: 362 HAGGQQRWLSWVVVPEDTL------LYVVARDITSER--EAAL----------------S 397

Query: 428 LAEANQRLQNEMFERERAEDALRHAQKMEAVGQLTGGIAHDFNNMLTGIIGSLDLMQRYI 487
           LA+AN RL+ ++ ERER E AL+  Q++EAVGQLT G+AHDFNN+LT I+     ++R +
Sbjct: 398 LADANARLREQINERERIEAALQQMQRLEAVGQLTAGVAHDFNNLLTVILTGASFLERDL 457

Query: 488 AAGRSDEIGRFTDAAVSSAHRAAALTHRLLAFSRRQSLDRRPLDPNQLVASLEDLFRRTK 547
           A    D+          +  R A LT +LLAFSRRQ L+  PL+ N+ +A LE+L RRT 
Sbjct: 458 AKADLDKARTRLTHIREAGERGAKLTSQLLAFSRRQRLEPVPLNLNRTLAGLEELLRRTL 517

Query: 548 GAHITLKVKLGHDIWPVNTDASQLENALLNLVINARDAMPDGGELLIETANSYLDGTDIT 607
           G +I++++ L   +W   TD +Q E  +LNL INARDAM DGG+L + T N+ +D     
Sbjct: 518 GGNISVRLDLDLALWQALTDPTQTEMIILNLAINARDAMSDGGQLTLTTRNTLIDKRPQR 577

Query: 608 TLEPVKAGDYVMLGVCDNGTGMAPKILAKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGG 667
             +P   G+YVML + D G GM+ ++LAK F+PFFTTK IG+G+GLGL+ ++GFA+QSGG
Sbjct: 578 PEDP-DPGEYVMLSIRDTGCGMSEEVLAKVFEPFFTTKDIGKGSGLGLAQVFGFAKQSGG 636

Query: 668 HVTIQSEPGQGTCVRLYLPRLYGTALESSLPPHLSEAPVALAG--EAVVVVEDDPAVRML 725
            V I +  G+GT V +YLP +    +   +P  LS++ ++ +G    V++V+DD  VR +
Sbjct: 637 GVRIDTTLGRGTEVAVYLPAVKEEMVNEPVPAVLSQS-ISESGHNRTVLLVDDDHLVRDM 695

Query: 726 VVNVLDELGYTAHQAADARTALPLLESDLRVDLLVTDVGLPGMNGRQLAEIARQYRPGLR 785
           + +VL + GY   QA     AL LL+ D  +DLL+TD  +P  NG QLA  AR+  P L 
Sbjct: 696 LGDVLRQYGYQVRQAHSGEQALALLDDD--IDLLLTDFAMPEFNGAQLALAARERYPRLP 753

Query: 786 VLFMTGYAEKAAERQGFLEDGMDMVAKPFSIDLLATKIRSMISV 829
           V+F+TGY    AE QG    G  ++ KP   D LA  +  M+ +
Sbjct: 754 VVFLTGY----AELQGLELPGSLVIQKPVQADELARALNEMLGI 793



 Score = 33.1 bits (74), Expect = 6e-05
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)

Query: 755 RVDLLVTDVGLPGMNGRQLAEIARQYRPGLRVLFMTG-YAEKAA 797
           R DL++ D  LPG +G ++  IA++  P +  +F++G Y E+ A
Sbjct: 51  RYDLILCDCVLPGSSGTEVLAIAQRLAPDIPFIFLSGIYGEEHA 94