Pairwise Alignments

Query, 220 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 258 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  116 bits (291), Expect = 3e-31
 Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 12/208 (5%)

Query: 21  GFQASVYVSALAIIFGTLIGIVAGLILTYGKFWMRAPFRLYVDLIRGTPVFVLVLACFYM 80
           G   +  ++  A++ G ++G+ A L+       +  P R YV L+RGTP+ V ++  +  
Sbjct: 22  GLWLTCLIAVSAMLLGCVLGLAAALLRLSKNPLLHLPVRFYVWLMRGTPLLVQIVFLYTA 81

Query: 81  LPALGW----QITAF--------QAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAI 128
           L A G      I  F        QA  + L L  G++++EI+R  + A+ +GQ EAG+++
Sbjct: 82  LAAGGIFRFEDIDLFGLVVPGNIQAAIIALGLNEGAYMAEIIRAGIGAVDKGQYEAGRSL 141

Query: 129 GLTFYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMT 188
           G+ F + +  ++LPQA R I+P   N    ++K +TL+SVIGV ELLLSTQ V + TF  
Sbjct: 142 GMGFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVIGVQELLLSTQMVTSATFRV 201

Query: 189 LEFYLFAGFMFFVINYAIELFGRYIEKR 216
            E YL     F ++      F R++E R
Sbjct: 202 FELYLVVAIYFLMLTTLWGFFQRWLEAR 229