Pairwise Alignments

Query, 220 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  121 bits (304), Expect = 1e-32
 Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 2/207 (0%)

Query: 12  WIARETLWAGFQASVYVSALAIIFGTLIGIVAGLILTYGKFWMRAPFRLYVDLIRGTPVF 71
           W A    W G   ++++S ++   G +IG+ AGL        +R    +YV+L+RGTP+ 
Sbjct: 113 WAAGPLAW-GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLL 171

Query: 72  VLVLACFYMLPALGWQITAFQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLT 131
           V +   FY        ++   AG   L LF G++V+EIVR  +Q+I +GQ EA +++GL 
Sbjct: 172 VQIFI-FYFFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLN 230

Query: 132 FYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEF 191
             QS+ +V+LPQA +++LP        +VK ++L+SVI + EL  S ++ I  +F T E 
Sbjct: 231 AGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290

Query: 192 YLFAGFMFFVINYAIELFGRYIEKRVA 218
           +     ++ +IN  +      +E+R+A
Sbjct: 291 WFCVAGLYLLINLPLSHIASRLERRLA 317