Pairwise Alignments

Query, 220 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 219 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  125 bits (314), Expect = 6e-34
 Identities = 70/211 (33%), Positives = 123/211 (58%), Gaps = 2/211 (0%)

Query: 11  LWIARETLWAGFQASVYVSALAIIFGTLIGIVAGLILTYGKFWMRAPFRLYVDLIRGTPV 70
           +W A   L  G + ++++S L ++ G +IG+VAG   TYG +       +++++IRGTP+
Sbjct: 8   IWPAIPILLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIANHIALVFIEVIRGTPI 67

Query: 71  FVLVLACFYMLPAL--GWQITAFQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAI 128
            V V+  ++ LP      +I  F A  V + +  G++++EI RGA+ +I +G  EAG A+
Sbjct: 68  VVQVMFIYFALPMAFTDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLAL 127

Query: 129 GLTFYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMT 188
           GL+  +++ +V+LP ALR++LP   N     +K ++L  VIGVAEL    Q++IA  F  
Sbjct: 128 GLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRA 187

Query: 189 LEFYLFAGFMFFVINYAIELFGRYIEKRVAL 219
           LE +     ++ +I   +    R +E+R+ +
Sbjct: 188 LEIWSAVAVVYLIITLVLSFVLRRLERRMKI 218