Pairwise Alignments

Query, 220 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 226 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  132 bits (331), Expect = 7e-36
 Identities = 72/185 (38%), Positives = 106/185 (57%)

Query: 15  PSLLAGLGLGLELALLSIAIGCVIGLMMAFAMLSKHRALRVFASVYVTVVRNTPILVLIL 74
           P LL G+G+ + L + +IAIG  + L +A   +S HR L   A  Y+ V R TP+LV I+
Sbjct: 14  PFLLGGVGITIGLTIATIAIGLALALPLALGSMSSHRFLSAPARFYIWVFRGTPLLVQIV 73

Query: 75  LIYFALPNLGIRLDKIPSFIITLSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEWRI 134
           +IY  LP LG+R D + S ++ LSL   AYL+E  R G   I KG  EA  A+ L  +  
Sbjct: 74  IIYTGLPQLGLRFDVLTSAVLALSLNEAAYLSETIRGGFSAIAKGQVEAAKALSLSRFAT 133

Query: 135 RAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVT 194
              +T+P +LR ++P L N+   L K TSLA+ I++ EL   A+ +  E + V+E + V 
Sbjct: 134 LRLVTLPQVLRVIIPPLGNSVNGLLKATSLASVISMEELMRRAQVLMQEKFEVLELYCVA 193

Query: 195 TALYV 199
              Y+
Sbjct: 194 ACFYL 198