Pairwise Alignments

Query, 282 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 248 a.a., Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 92.4 bits (228), Expect = 9e-24
 Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 26/262 (9%)

Query: 12  VFLFAASASLASIVQAADSKLDDVLKRGHLIVGTGSTNAPWHFQGADGKLQGFDIDIGRI 71
           V L A + + A    AAD KL         +V T +   P+ F+  D K  GFD+D+   
Sbjct: 7   VSLAALTLAFAVSSHAADKKL---------VVATDTAFVPFEFKQGD-KYVGFDVDLWDA 56

Query: 72  VAKGLFNDPSKVEFVVQSSDAR--IPNLLTDKVDMSCQFITVTASRAQQVAFTLPYYREG 129
           +AK L     K+++ ++  D    IP L T  +D++   IT+T  R + + F+  YY+ G
Sbjct: 57  IAKEL-----KLDYTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDGYYKSG 111

Query: 130 VGLLL-PNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQA 188
           + +++  NN+  K ++DL    DG  VAV     + +     +    + Q+ ++D  Y  
Sbjct: 112 LLVMVKANNNDIKSVKDL----DGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYME 167

Query: 189 VNSGRADAAATDQSSVKY-LMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTALH 247
           + + RADA   D  ++ Y +     G++++   +   Q Y  A  +G  +    VN AL 
Sbjct: 168 LGTNRADAVLHDTPNILYFIKTAGNGQFKAVGESLEAQQYGVAFPKGSDELREKVNGAL- 226

Query: 248 EAMTGVEFPTYKASFKQWFGVD 269
              T  E  TY   +K+WFG +
Sbjct: 227 --KTLRENGTYNEIYKKWFGTE 246