Pairwise Alignments

Query, 282 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 266 a.a., Cystine ABC transporter, periplasmic cystine-binding protein FliY from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 99.8 bits (247), Expect = 6e-26
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 12/263 (4%)

Query: 12  VFLFAASASLASIVQAADSKLDDVLKRGHLIVGTGSTNAPWHFQGADGKLQGFDIDIGRI 71
           V   A  A +++   A +  L+ V +RG L+VG   T  P+ FQG DGKL GF++D    
Sbjct: 14  VMAVALVAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGEDGKLTGFEVDFAEA 73

Query: 72  VAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTLPYYREGVG 131
           +AK L     K        D  + +L   ++D+    +T++  R ++  F+ PY   G+ 
Sbjct: 74  LAKHL---GVKASLKPTKWDGMLASLDAKRIDVVINQVTISDVRKKKYDFSTPYTVSGIQ 130

Query: 132 LLLP--NNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAV 189
            L+   N    K   DLQ    G  V V      EE + Q +    +  YD     YQ +
Sbjct: 131 ALVKKGNEGTIKTAADLQ----GKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDL 186

Query: 190 NSGRADAAATDQSSVKYLMVQNPGRYRSPAYAWSPQTYACAVKRGDQDWLNFVNTALHEA 249
             GR DA   D+ +   L+ +  G       A+S Q    A+++G++D L  V+ A+ E 
Sbjct: 187 RVGRIDAILVDRLAALDLVKKTKGTLAVTGDAFSRQESGVALRKGNEDLLKAVDNAIAEM 246

Query: 250 MTGVEFPTYKASFKQWFGVDLPE 272
               +  T KA  ++WFG D+ +
Sbjct: 247 Q---KDGTLKALSEKWFGADVTQ 266