Pairwise Alignments

Query, 326 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 311 a.a., transcriptional regulator from Agrobacterium fabrum C58

 Score =  122 bits (307), Expect = 9e-33
 Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 12/309 (3%)

Query: 15  MTEVAMLYYLENVTQEAIAKRFDLSRAKVSRLLKRARDEGIVEVRVLQHPAMNNELERAL 74
           M  V +L+++E V Q  IA+R +LS  KV+R++   R  G+V++ +        +LE  +
Sbjct: 1   MYSVLVLHFIEGVKQSEIAERMNLSHTKVNRMIAAGRKAGMVKITIASPYQRLVDLENEI 60

Query: 75  VERFKLDRALIAVDHSE-PDTQRSAVASLVANYLNKTLSDGMIVAVGMGRNVGAVADNVF 133
             RF L ++++    S+ P+T    V  + AN+L +T+ DG ++A+  G+ V AV DN+ 
Sbjct: 61  SRRFGLTQSVVTPTVSDNPETVLQMVGRVAANHLLETIRDGDVIAITGGKAVSAVVDNLE 120

Query: 134 LPVTRNCTFVCAIGGSLKAGEYMNPDHICRRLALRFGGESESLYAPALVANPELRGVLIN 193
               R    V  + G ++   Y + +H+  +LA + GG +  L+AP    + E R +L+N
Sbjct: 121 AE-RRFDVRVVPLTGGVQGKHYTDVNHLATQLAEKLGGSASLLHAPLFAEDEEQRDLLMN 179

Query: 194 NDTVRSTLDRARRADIALIGIGDMSENSNMVRMGWFSPQEIA----QARLS-GTVGDMMG 248
             ++R   D AR+A +AL+GIG +    +    G++     A    QA +  G  G+ + 
Sbjct: 180 VASIREVFDLARQAQVALVGIGSVEAPGS----GYYDLLPDAARGGQALMDVGIAGEFLA 235

Query: 249 YDFIDIHGQPAVNAIQGRVIGLTVPELFRIPDVVAIASENTKAAATLGALRSGVINTLAT 308
           +      GQ A   +  RV+ L   +L R P+++ +A+   KA      L    + +L  
Sbjct: 236 H-LTMADGQLARIDLNSRVVALDPRQLARCPNIIGVAAGAIKAGPVAATLAGRYLTSLVV 294

Query: 309 TVTNAHTIL 317
               A  +L
Sbjct: 295 DEAIASYLL 303