Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 307 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 2e-31
 Identities = 85/278 (30%), Positives = 142/278 (51%), Gaps = 17/278 (6%)

Query: 13  LSLLACSI-------AMAADGKTYKVGAAVYGLKGQFMQNWVRELKEHPAVKDGTVQLTV 65
           L LLA SI       A A   K  ++GA+   +   +       L+E  A      +L +
Sbjct: 8   LCLLAVSITLGTAAPAFADAAKPIRIGASFQEINNPYFVTMKNALEEAGATIGA--KLII 65

Query: 66  FDGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKVADAS 125
            D  +D   Q + +E+M+ +  D +L  P D+      VK+A +  VVV+A + +     
Sbjct: 66  TDARHDVSKQVSDVEDMLQKGIDILLINPTDSVGVQSAVKSAHAAGVVVVAVDAQADGPL 125

Query: 126 VPYVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGELEVLGKHPDIKI 185
             +VG+ + + G    + +   +  KGN+ I+ G I     ++R +G  E + KHPDIKI
Sbjct: 126 DSFVGSKNFDAGFQACEYLAKNIGDKGNIAILDG-IAVVPILERVRGCKEAVAKHPDIKI 184

Query: 186 IEKKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALKSHGLTSKDVPVTS 245
           +  +    +R QAL +TE+ L A P  + G+ + ND+ +LGA+ A+++ GL   DV + S
Sbjct: 185 VSIQNGKQERDQALTVTENMLQAQPT-LKGIFSVNDNGSLGALSAIEASGL---DVKLVS 240

Query: 246 IDGMPDAIQAAKKDE---VTTFLQDAQAQSQGALDVAL 280
           +DG P+AI+A +K     + T  Q  + Q + AL +AL
Sbjct: 241 VDGAPEAIKAIQKPGSKFIATSAQYPRDQIRLALGIAL 278