Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 306 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  130 bits (328), Expect = 3e-35
 Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 18/297 (6%)

Query: 7   LAATAALSLLACSIAMAADGKTYKVGAAVYGLKGQFMQNWVRELKEHPAVKDGTVQLTVF 66
           L+ + + SLL   +A AA   T  +G  +      F       +++  A+ D  + +   
Sbjct: 5   LSISLSASLLFAGLAQAA---TPLIGVGMAKYNDNFQTILRHGVEKQVALLDADIFME-- 59

Query: 67  DGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKVADASV 126
           +G  D   Q  Q  N+V  + DAI+   +  K+    ++ A    V ++  N     A+ 
Sbjct: 60  NGQDDVELQMRQFRNLVNSKVDAIVVAMVSGKSAPEMMRLANEAKVPLVFVNRNPEPATW 119

Query: 127 P----YVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGELEVLGKHPD 182
           P    +VG+D++E G LQ + +  + N KGNVVI+ G     + + R +   +V+ K+PD
Sbjct: 120 PALTAFVGSDELESGTLQMEELARRANYKGNVVILVGDPSNKSSVMRTEDVEKVVAKYPD 179

Query: 183 IKIIEKKTANWDRAQALALTEDWLNAHPKGING--VIAQNDDMALGAVQALKSHGLTSKD 240
           +K+++KK  NW+R+QA  +  +W+    +G++   + A ND+MA+GA+  L+  G  + D
Sbjct: 180 MKVVQKKIGNWERSQAATIVIEWVK---QGVDFSIIAANNDEMAIGAIMGLEKTGKKAGD 236

Query: 241 VPVTSIDGMPDAIQ--AAKKDEVTTFLQDAQAQSQGALDVALRALAGKDYKPQSVIW 295
             V  IDG PD ++  A  K  V+ F QDA  Q+ GA+D A+R   G+      VIW
Sbjct: 237 YLVGGIDGTPDGLKLMAEGKMAVSVF-QDALGQANGAVDAAMRMARGETL-ASPVIW 291