Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 315 a.a., D-ribose ABC transporter substrate-binding protein from Rhizobium sp. OAE497

 Score =  105 bits (263), Expect = 1e-27
 Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 7/213 (3%)

Query: 71  DALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKVAD---ASVP 127
           D  T++N I+  +T +  AI+  P +    VG VK A++  + VI  N ++     A   
Sbjct: 67  DTNTESNLIDTAITNKSVAIILDPANADGSVGAVKKAVAAGIPVILVNAEINQEGLAKAQ 126

Query: 128 YVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGELEVLGKHPDIKIIE 187
            V N+  +G  L AQ  V+ +  KGN   + G    +    R  G   VL ++PD+K + 
Sbjct: 127 LVSNN-AQGAALGAQQWVEAVGDKGNYAELFGAPSDNNAATRSNGYETVLSQYPDLKKVA 185

Query: 188 KKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALKSHGLTSKDVPVTSID 247
           K+ A+WDR +     +  L A+P  I GVI+ ND+MALGA+ ALK  G  + ++ V   D
Sbjct: 186 KEVADWDRTKGHNKMQSMLQANP-DIVGVISGNDEMALGAIAALKEAGKLA-NIKVGGFD 243

Query: 248 GMPDAIQAAKKDEVT-TFLQDAQAQSQGALDVA 279
           G PDA+ A K  E+  T LQ     S+ A+  A
Sbjct: 244 GSPDAVAAIKAGELQYTVLQPVAIFSEEAVKQA 276