Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 309 a.a., sugar ABC transporter substrate-binding protein from Rhizobium sp. OAE497

 Score =  132 bits (333), Expect = 9e-36
 Identities = 88/289 (30%), Positives = 152/289 (52%), Gaps = 17/289 (5%)

Query: 7   LAATAALSLLACSIAMAADGKTYKVGAAVYGLKGQFMQNWVRELKEHPAVKDGTVQLTVF 66
           L  T+A++L+  S A AAD    ++G ++  L   F    V  ++++   K   V+L + 
Sbjct: 4   LLTTSAVALVLASQAHAAD----RIGVSMGTLSNNFQTLIVNGMEDY--AKSIGVELQIE 57

Query: 67  DGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKVADASV 126
           D   D   Q +Q++N       AI+  P+D+       K A    + +I  N +  D + 
Sbjct: 58  DATTDVNKQLDQVKNFAAGGVSAIIVDPVDSDGTPALSKVAEDAGIPLIYVNVQPTDLNT 117

Query: 127 -----PYVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGELEVLGKHP 181
                 +VG+++ E G LQ + +   L GKGNVVI+ G +   A   R +   +V+ K P
Sbjct: 118 LGKQQAFVGSNETESGTLQTKEVCRMLGGKGNVVIMIGDLTSQAARQRTQDVHDVV-KTP 176

Query: 182 D---IKIIEKKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALKSHGLTS 238
           +   I + +++  NW R     L  +WL +  +  + +IA ND+MALGA+ ALK+ G ++
Sbjct: 177 ECSGINVAQEQVGNWSRVNGADLVSNWLTSGVE-FDAIIANNDEMALGAISALKAAGAST 235

Query: 239 KDVPVTSIDGMPDAIQAAKKDEV-TTFLQDAQAQSQGALDVALRALAGK 286
             + V+ ID  P+A+QA K  ++  T  QDA+ Q +G++D A++A+ G+
Sbjct: 236 DKIIVSGIDATPEALQAMKTGDLKVTVFQDAKGQGKGSIDAAMKAIKGE 284