Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 310 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  119 bits (297), Expect = 1e-31
 Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 9/288 (3%)

Query: 9   ATAALSLLACSIAMAADGKTYKVGAAVYGLKGQFMQNWVRELKEHPAVKDGTVQLTVFDG 68
           A AA +L A     A D     +G AV  L+  F  N +++  E      G   +TV D 
Sbjct: 12  ALAAATLTAAGTTWAKD---LTIGLAVANLQADFF-NQIKQSVEAEGKAKGIKVITV-DA 66

Query: 69  NYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKVADA-SVP 127
             ++ TQ +QIE+++T++ D ++++P    A    VKAA +  + VIA +    DA    
Sbjct: 67  QGNSSTQVSQIEDLITRQIDVLIYIPAGATAAGVPVKAAKAAGIPVIAVDRNAPDAPGDT 126

Query: 128 YVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGELEVLGKHPDIKIIE 187
           ++ +D V G +  A+ +    +GKG + I+QG +G + + DR KG  E L   PD+KI+ 
Sbjct: 127 FIASDSVAGAKTLAEYVGKLTDGKGRIAILQGQLGTTPENDRAKGFEEGLKAFPDLKIVA 186

Query: 188 KKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALKSHGLTSKDVPVTSID 247
           ++ A W + +  A+ +D L   P  I     + D MALGA QA+K   L  K V V   D
Sbjct: 187 QQPAEWAQDKGFAVAQDLLQRDP-NITVFFGRADAMALGAAQAVKVGNLDHK-VVVVGFD 244

Query: 248 GMPDAIQAAKKDEV-TTFLQDAQAQSQGALDVALRALAGKDYKPQSVI 294
           G    ++A +   +  T  Q  Q   + A+  A+   AGKD   + ++
Sbjct: 245 GDVAGLKAVQSGVLNATMTQQTQKMGRLAVASAIDLKAGKDVPREQLL 292