Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 318 a.a., predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  102 bits (254), Expect = 1e-26
 Identities = 84/268 (31%), Positives = 130/268 (48%), Gaps = 13/268 (4%)

Query: 7   LAATAALSLLACSIAMAADGKTYKVGAAVYGLKGQFMQNWVRELKEHPAVKDGTVQLTVF 66
           L   +A+S    S+A+AA      VG +  G +  +        K   A K G + L + 
Sbjct: 5   LLIVSAVSAAMSSMALAAP---LTVGFSQVGSESGWRAAETNVAKSE-AEKRG-ITLKIA 59

Query: 67  DGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVV--IASNTKVADA 124
           DG      Q   + + V Q  DAI   P+        +K A   ++ V  +  +  V D 
Sbjct: 60  DGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDK 119

Query: 125 SV--PYVGNDDVEGGRLQAQAMVDKLNGKG-NVVIIQGPIGQSAQIDREKGELEVLGKHP 181
           S+    V  D++  G+L    +V ++NGK  NVV +QG +G S  IDR+KG  E +   P
Sbjct: 120 SLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAP 179

Query: 182 DIKIIEKKTANWDRAQALALTEDWLNAHPKGIN--GVIAQNDDMALGAVQALKSHGL-TS 238
           +IKII  ++ ++ R++   + E ++ A   G N   V A NDDM +GA+QA+K  GL   
Sbjct: 180 NIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPG 239

Query: 239 KDVPVTSIDGMPDAIQAAKKDEVTTFLQ 266
           KD+   SIDG+PD  +A    E    ++
Sbjct: 240 KDILTGSIDGVPDIYKAMMDGEANASVE 267