Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 332 a.a., methyl-galactoside transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 90/300 (30%), Positives = 141/300 (47%), Gaps = 26/300 (8%)

Query: 6   TLAATAALSLLACSIAMAADGKTYKVGAAVYGLKGQFMQNWVRELKEHPAVKDGTVQLTV 65
           TL+A  A S+L  + A AAD +   +G  +Y     FM + VR+  E  A     VQL +
Sbjct: 7   TLSAVMA-SMLFGAAAHAADTR---IGVTIYKYDDNFM-SVVRKAIEQDAKAAPDVQLLM 61

Query: 66  FDGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKVADAS 125
            D   D   QN+QI+ ++ +   A+    +D  A    ++ A   +V V+  N + +  +
Sbjct: 62  NDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKA 121

Query: 126 VP------YVGNDDVEGGRLQAQAMVDK--------LNGKGNV--VIIQGPIGQSAQIDR 169
           +       YVG D  E G +Q   +           LN  G +  V+++G  G      R
Sbjct: 122 LDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEAR 181

Query: 170 EKGELEVLG-KHPDIKIIEKKTANWDRAQALALTEDWLNA-HPKGINGVIAQNDDMALGA 227
               ++ L  K    + ++  TA WD AQA    + WL+  +   I  VIA ND MA+GA
Sbjct: 182 TTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGA 241

Query: 228 VQALKSHGLTSKDVPVTSIDGMPDAIQAAKKDEVT-TFLQDAQAQSQGALDVALRALAGK 286
           V+ALK+H  +S  +PV  +D +P+A+   K   +  T L DA  Q++   D+A     GK
Sbjct: 242 VEALKAHNKSS--IPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGK 299